Gene Pfl01_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2141 
Symbol 
ID3715838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2424632 
End bp2425417 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID 
ProductDeoR family transcriptional regulator 
Protein accessionYP_347873 
Protein GI77458368 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATC ATTCCGCTTC CGAGCTTCCC TCCCTGCGCC GGCAGAAAAT CCTTCTGATC 
CTCGAACGTG ACGGCAAGGT CATGGCGTCC GAGTTGAGCC AGCATTTTGC GGTGTCCGAA
GACACCATCC GCCGCGATCT CGCCGAGCTG GACAACGCCG GACTGGTGCA GCGAGTGCAC
GGCGGCGCGC TGCCGAGGCC CAAGGACACC GGCAAGGATT ACTTCACCCG GCTGGACGAG
ATCGACGAGG TGAAAATCCG TCTGGCGCAA TTGGCGGCGC AGCAGGTGCG CAACGGGCAG
ACGGTGATGT TCGACTCCGG TTCCACCTCG TTGCAGGTGG CGCGTTCGTT GCCCAGGGAC
ATCAGCCTCA CGGCGGTCAC AGCATCGCCG ATGACGGCGA TTGCGTTGTC CGAATACCCT
GGCATCAAAG TGATTCTGGC GGGCGGGCAG CTCAATCCGA AAACCATGTC CGCCGGCGGT
CACGAGGCGC TGCGGCTGCT GTGGGGGATC AAGGCGGATC TGGCGATCAC CGGGGTCTGC
GCGATTCATC CGGAGGTGGG CATCACCTCG CTGCATTTCG ATGAAGTGCC GGTCAAACAG
GCGCTGCTCG ACTGTGCGAC GCGGGTAATT GCCGTGACCA CGGCGGATAA GCTCGGCGCG
GTGGAGCCGT TTGTGGTGGC GCCGTGCGAG CGCTTGCACA CGCTGATCAC CGAACGGCAT
GTGGCGTCGG GGAGTGTCGA GGATTATCGG CGGTTGGGGA TTGAGGTGGA GCAGTTGCCC
GACTGA
 
Protein sequence
MHDHSASELP SLRRQKILLI LERDGKVMAS ELSQHFAVSE DTIRRDLAEL DNAGLVQRVH 
GGALPRPKDT GKDYFTRLDE IDEVKIRLAQ LAAQQVRNGQ TVMFDSGSTS LQVARSLPRD
ISLTAVTASP MTAIALSEYP GIKVILAGGQ LNPKTMSAGG HEALRLLWGI KADLAITGVC
AIHPEVGITS LHFDEVPVKQ ALLDCATRVI AVTTADKLGA VEPFVVAPCE RLHTLITERH
VASGSVEDYR RLGIEVEQLP D