Gene Pfl01_2002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2002 
Symbol 
ID3716140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2284680 
End bp2285771 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content63% 
IMG OID 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_347734 
Protein GI77458229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.446377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGG AGGGAGCCGA CATGACCCAG CCAACGCCGC GCTCCCGCGC CCTGGGCATG 
CACCTGATTC TGGTGCTGAT CACCTGCCTG CTCGGCAGTC AGGTGCTCAT CGCCCATCAG
GCGCAGCCCG AAGGCGCCAG TGAATCCGCC ACCCCGTGGG GTGGCGACTA TTTCCCCAAC
ACCCTGCTGA CCGACCAGGA CGGTCGGCAG GTGCGCTTTT TCGATGACCT GATCAAAGAC
AAGGTGGTGG TGATCAACTT CATCTTCACC TCGTGCAGCG ACTCCTGCCC GCTGGAAACC
GCGCGCCTGC GCCAGGTGCA GAAACTGCTG GGGGACCGGG TCGGGAACGA CATCTTCTTC
TACTCGATCA CCATCGATCC GCTGAGCGAC ACCCCCGAAG TGCTCAAGGC CTATGCGCAA
CGCTTCAAGG TCGGCCCCGG CTGGAAATTC CTCACCGGCG AGTTCGAAGA CGTCACCGAA
CTGCGCAAGA AGCTCGGGCT GTTCATCGAA GGCGTCGACA ACGGGCGCAC CAAGGACCAC
AACCTGAGCC TGATCGTCGG CAATCAGAGC ACCGGGCGCT GGATGAAAGC CTCGCCGTTC
GAGAACCCGT GGATCCTCGC CGACCAACTC GCCAACACGC TGCAGAACTG GAAGCAGGCC
AGCAGCGAAG AAAGCTATGC CGATGCCCCG CAGATTCGTC CGCCGAGCAA TGGCGAAGAG
CTGTTCCGCA CCCGCTGCGC TTCCTGTCAC AGCCTCGGCC CGCAGGACGG CGAAGGCATC
GGCATGCGCA ACATCGGCCC GGACCTGATC GGCGTGACCC GTCAGCGTGA CGCGGCCTGG
CTCAATCGCT GGATCCGCGA ACCGGATCGG GTGCTGGCGG AGAAAGACCC GATCGCAGTG
CAACTGTTCG AGCAATACGA GCGTATTCCG ATGCCCAATC TGCGCCTGGA CGAGGCCTCG
GCGCAGTCGA TCATCGACTT TCTGAGTGCC GAAACCGAGC GTCAGCATCC GTCCGTGCAG
CCCTTGGCCG ACGGGGCATT GACGCCAGTA AAACCAGCTT CTGCCAGCGA AACGGTGAGT
CGTATGCAGT AG
 
Protein sequence
MSREGADMTQ PTPRSRALGM HLILVLITCL LGSQVLIAHQ AQPEGASESA TPWGGDYFPN 
TLLTDQDGRQ VRFFDDLIKD KVVVINFIFT SCSDSCPLET ARLRQVQKLL GDRVGNDIFF
YSITIDPLSD TPEVLKAYAQ RFKVGPGWKF LTGEFEDVTE LRKKLGLFIE GVDNGRTKDH
NLSLIVGNQS TGRWMKASPF ENPWILADQL ANTLQNWKQA SSEESYADAP QIRPPSNGEE
LFRTRCASCH SLGPQDGEGI GMRNIGPDLI GVTRQRDAAW LNRWIREPDR VLAEKDPIAV
QLFEQYERIP MPNLRLDEAS AQSIIDFLSA ETERQHPSVQ PLADGALTPV KPASASETVS
RMQ