| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1987 |
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| Symbol | |
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| ID | 3716125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 2267635 |
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| End bp | 2269482 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_347719 |
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| Protein GI | 77458214 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0115184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.227908 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAT CCCGTTTGCT GATGAGCCTC GGCCTGTGTG CCGGGCTGGC CGCGTGCAGT
TCCGCGCAGG TCGCCAACAA GGAAGCCGCC GACCTGATCG ATCAGGGGCA GTACGAGGCG
GGCCTGGCCC GGATCGAGGA AGGCTTGCGG GAAAATCCGC GCGACACCGA GCTGCACCTG
CTGCTCAACA GCGGCCGGGC CAAGGCGATC ACCGCGCTGC TGACCTCCGG CGACACCGAC
CGCGCCCGCC GCGACTTCGC CTCGGCCCGC ACCGCCTACA GCCGGGTGCT GACCATCGAG
CCGAACAACC GCCGCGCCCA GGATGCCCTG CGCCAGCTCG ACTACCTGCG CAGCATGGAT
GAGAAACTTG AGCTGGCCCG TGGCGACCTG CGCCGGGGCG ACATCTACGG CGCCGACCGT
CAGGTCAAAC AGATCCTTGA ACTCGACCCG AAAAACGACG GCGCGCTGGA GCTGCAAGGC
AACATCCGTC TGGTGCAGAG CCGCAACGTG ATCCAGTACC CGCAACTGCG CACCCGGCTT
GATCGCCCGG TGACCCTGGA ATTTCGCGAC GCCAACCTCA AGACCATTTT CGAAGTGCTG
TCGCAGGTTG CCGGCCTGAA TTTCATCTTC GACAAGGACC TGCGTCCGGA CATGAAAGCC
ACGATCTTCG TGCGTGACGT GCGCATCGAA GACGCCGTGC AACTGCTGCT GCAACAGAAC
CAGCTGCACC AGAAAGTGGT GAACGAAAAC ACCTTGCTGA TCTTTCCGGA CTCGCCGCAG
AAGCTCAAGG ATTACCAAGA GCTGGTGATG CGCACCTTCT ATCTGACCAG CATCGACGCC
AACACCGCGC TGAACATGAT CAAGACCATG CTCAAGACCC GTGACGTGTT CGTCGACGAA
CGCCTGAACA CCCTGACCAT GCGCGACACC GAAGACGCCG TGCGCATGGC CGAGAAACTC
CTGCAATCGC AAGACCAGTC CAACCCCGAA GTGGTGCTGG AAGTGGAAGT GATGGAAGTC
GCCACCCAGC GCATTCTCGA CCTCGGCCTG CAATGGCCGA ATACCTTCGG CGTGGTCAAC
AGCGACGGTT CGGCGGTGAC CATTCTCGAT CAACTGAAAG GCATCAACTC CAGCCGGATT
TCGATCTCGC CGTCGCCGCA AGCCAAGATC AATGCGCAGG ACAACGACAT CAACACCCTG
GCCAGCCCGG TGATCCGCGT CAGCAACCGC GAACAGGCGC GTATCCATAT CGGTCAGCGG
GTGCCGATCA TCAGCGCCAC CTCAGTGCCA TCCACTCAAG GCCCGGTTAT CACCGAAAGC
GTCACCTACC TCGACGTCGG TCTCAAGCTT GAAGTGCAAC CGACCGTGCA CTTGAACAAC
GAAGTAGCAA TCAAGATCGC CCTGGAAGTG AGTAACGCCA CGCCGCTGGA GCCGACCCGC
CAAGGGACGA TTCCGGTGCA GGTCGACACC CGCAACGCCC AGACTTCGCT GCGTCTGCAT
GACGGCGAAA CCCAGATCCT TGCCGGCCTG ATGCGCAACG ACCACGGCGC CACCGGCAAC
AAGATTCCGG GCCTTGGCGA CATTCCGGGT CTGGGTCGGT TGTTCGGCAG CAACAAGGAC
ACTATCGGCA AATCGGAACT GGTGCTCTCG ATCACCCCAC GGATCGTGCG CAACCTGCCG
TACCAGAGCC CGTCGGACAT GGAATTCCCC ACCGGCACCG AAACCAGCAT GCACATCCAG
GCGCCGGATC GCTCGCAAAG CTACTCGATG CCAGCGCCTG CCGCGCAGCC TCGTGCAGTC
GGTGAAGCGG CCGTGGCCAC CACCCGTGTA ACCGTCGAGA AGCCTTGA
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| Protein sequence | MNRSRLLMSL GLCAGLAACS SAQVANKEAA DLIDQGQYEA GLARIEEGLR ENPRDTELHL
LLNSGRAKAI TALLTSGDTD RARRDFASAR TAYSRVLTIE PNNRRAQDAL RQLDYLRSMD
EKLELARGDL RRGDIYGADR QVKQILELDP KNDGALELQG NIRLVQSRNV IQYPQLRTRL
DRPVTLEFRD ANLKTIFEVL SQVAGLNFIF DKDLRPDMKA TIFVRDVRIE DAVQLLLQQN
QLHQKVVNEN TLLIFPDSPQ KLKDYQELVM RTFYLTSIDA NTALNMIKTM LKTRDVFVDE
RLNTLTMRDT EDAVRMAEKL LQSQDQSNPE VVLEVEVMEV ATQRILDLGL QWPNTFGVVN
SDGSAVTILD QLKGINSSRI SISPSPQAKI NAQDNDINTL ASPVIRVSNR EQARIHIGQR
VPIISATSVP STQGPVITES VTYLDVGLKL EVQPTVHLNN EVAIKIALEV SNATPLEPTR
QGTIPVQVDT RNAQTSLRLH DGETQILAGL MRNDHGATGN KIPGLGDIPG LGRLFGSNKD
TIGKSELVLS ITPRIVRNLP YQSPSDMEFP TGTETSMHIQ APDRSQSYSM PAPAAQPRAV
GEAAVATTRV TVEKP
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