Gene Pfl01_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1956 
Symbol 
ID3716268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2230538 
End bp2231488 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content60% 
IMG OID 
Producttranscriptional regulator 
Protein accessionYP_347688 
Protein GI77458183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCG TGGCCATGGT GCTGTTTCCC GATTTTCTGC TGCTCGACAT GGCCGGGCCG 
CTGGAAGTGT TTTCGGTTGC CAACCGCTAC CTGAAACCGC AATCCCACTA TCACCTGACC
ACCCTGGGCA CCGAGCGCGG GCCGTTGCGT GCGTCCAATG GCGTGCTCGT GCACACCGAT
CGGCACATCG ACGAAGCCGA TGAGCGCTAT GACTTGCTGC TGGTACCGGG CGGCCCCGGC
GCCTACAACG AAAAACACCC GCCGTTGCTC GCCTGGCTGC AAGGCGCGGT CACGCGCGCC
GGGCAATATG GCTCGATCTG TACCGGCGCC TTCGTGCTGG GCCATGCCGG ACTGCTCGAC
GGCTATCGTG TGACCACCCA CTGGAATTAC ACCGAACGCT TGATCAAGGG CTTTCCGAAG
GCAAACGTCG CGACCGACCA GATTTTTATT GAAGATCGCA ACCTGATCAC CTCCGGAGGT
GTCACCGCCG GGATCGATAT GGCGTTGGCG GTGGTGGCTC GCGATCATGG CAAAAAGATT
GCCCAGGATG TGGCCAAGGT GCTGCTGGTC GTCATGAAAC GTCAGGGCGG GCAAGCGCAG
TTCAGCCCGT TGATGGCGGC AGTGGCGCCC CAGGAAACCC CGATCACCCG GGTGCAGAAC
CATGTGCTGG AGCACCTTGA AGAAGCTTTT ACCGTCGAGC GCATGGCAGG GCTTGCGAAC
ATGAGTGCGC GGCATTTTGC CCGGGTGTTT GCCCGTGAGG TCAACATGAC GCCCATGGAA
TTCCTGCAAA GTGCGCGCAT CGATTGCGCG CGCAATCTGC TGGAAACCAG CGATCTGCCG
TTGAAAACCG TGGCCTACAA AAGCGGTTTC GGCAGCGTGC GGCACATGCG TTTTCTGTTC
GGCGAAAAGC TTGGGCTGAC CCCGACGCAG TATCGCGAAC AGTTCAGCTA G
 
Protein sequence
MKTVAMVLFP DFLLLDMAGP LEVFSVANRY LKPQSHYHLT TLGTERGPLR ASNGVLVHTD 
RHIDEADERY DLLLVPGGPG AYNEKHPPLL AWLQGAVTRA GQYGSICTGA FVLGHAGLLD
GYRVTTHWNY TERLIKGFPK ANVATDQIFI EDRNLITSGG VTAGIDMALA VVARDHGKKI
AQDVAKVLLV VMKRQGGQAQ FSPLMAAVAP QETPITRVQN HVLEHLEEAF TVERMAGLAN
MSARHFARVF AREVNMTPME FLQSARIDCA RNLLETSDLP LKTVAYKSGF GSVRHMRFLF
GEKLGLTPTQ YREQFS