Gene Pfl01_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1946 
Symbol 
ID3716258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2221079 
End bp2222308 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347678 
Protein GI77458173 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAG AACACACTTA CCAACTGCTG GAAGTCGCCA ACGGCAAACC GATCAAGCTC 
TGGACCGAAG GCGTCCCGGT GGAAAACGAA GCGCGCGAGC AGTTGATGAA CACGGCGAAG
ATGCCCTTCA TCTTCAAGCA TCTGGCAGTG ATGCCGGACG TCCATCTGGG CAAGGGCTCG
ACCATCGGCA GCGTGATTCC CACGGTCGGC GCGATCATCC CGGCAGCGGT CGGGGTGGAC
ATCGGTTGCG GCATGATTGC CGCGCGAACC TCGCTGACGG CGGCCGATCT GCCGGACAAT
CTGCATGGCC TGCGCAGTGC CATCGAGCAA GCGGTGCCCC ATGGCCGCAG TTCGACCCGC
TCGCGCCGTG ACAAAGGCGC CTGGGACGAG ATTCCGCAAC AGGCCGATCA GGCCTGGGCG
GCGCTGAATC CACGCTTTAA GGCGATCACC GACAAGTACC CGAAACTGGC CAACACCAAC
AACCGCGGGC ATCTCGGAAC ACTGGGCAGC GGTAACCACT TCATCGAAGT GTGCCTGGAT
GAGGCCAACC GGGTCTGGTT CATGTTGCAC AGTGGCTCGC GCGGTGTCGG CAACGCCATC
GGCAACCTGT TCATCCAGAT GGCCCAGGCG GATATGCGTC AGCACATCGC CAACCTGCCG
GATCGTGATC TGGCGTACTT CGAAGAAGGC AGCCGGCATT TTGATGACTA CGTGGAGGCG
GTGGGCTGGG CTCAGGATTT CGCCAAACAG AACCGTGCGC TGATGATGCA AGCGGTGATT
CAGGCCACGC GACAGATTAT CCGCAAGCCA TTCGAAGTCG CGCTGGAAGC GGTGAACTGC
CACCACAACT ACGTGCAGAA AGAGCGGCAT TTCGGCGAGG ACATTCTGGT CACCCGCAAA
GGCGCGGTGT CAGCGAAGAA GGGCGAGTTG GGGATCATTC CCGGTTCGAT GGGCGCCAAG
AGTTTCATCG TGCGCGGTCT GGGCAACGAA GAATCGTTTT GCTCCTGCAG CCACGGTGCC
GGTCGGACCA TGAGCCGTAC CAAGGCCAAA AACACCTTCA CCGTCGAAGA CCAGATCCGC
GCCACCGCGC ACGTCGAATG TCGCAAGGAC GCTGCGGTGA TCGATGAAAT TCCGATGGCC
TACAAGGATA TCGACAAAGT CATGCACGCC CAGCGTGAGC TGGTTGAGGT GCTGCACACC
CTGCGTCAGG TGGTGTGCGT CAAGGGATAA
 
Protein sequence
MMKEHTYQLL EVANGKPIKL WTEGVPVENE AREQLMNTAK MPFIFKHLAV MPDVHLGKGS 
TIGSVIPTVG AIIPAAVGVD IGCGMIAART SLTAADLPDN LHGLRSAIEQ AVPHGRSSTR
SRRDKGAWDE IPQQADQAWA ALNPRFKAIT DKYPKLANTN NRGHLGTLGS GNHFIEVCLD
EANRVWFMLH SGSRGVGNAI GNLFIQMAQA DMRQHIANLP DRDLAYFEEG SRHFDDYVEA
VGWAQDFAKQ NRALMMQAVI QATRQIIRKP FEVALEAVNC HHNYVQKERH FGEDILVTRK
GAVSAKKGEL GIIPGSMGAK SFIVRGLGNE ESFCSCSHGA GRTMSRTKAK NTFTVEDQIR
ATAHVECRKD AAVIDEIPMA YKDIDKVMHA QRELVEVLHT LRQVVCVKG