Gene Pfl01_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1934 
SymbolrplT 
ID3716283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2203220 
End bp2203576 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content52% 
IMG OID 
Product50S ribosomal protein L20 
Protein accessionYP_347666 
Protein GI77458161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000268188 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGTG TAAAGCGTGG CGTCATTGCC CGTAAACGTC ACAAAAAAAT TCTGAAACTT 
GCTAAAGGCT ACTACGGCGC ACGCTCCCGC GTATTCCGTG TTGCCAAGCA AGCGGTAATC
AAGGCAGGCC AATACGCCTA CCGTGACCGT CGTCAGAAAA AACGTCAGTT CCGCGCTCTG
TGGATCGCTC GTATCAACGC TGGTGCTCGT GTTAACGGTC TGTCCTACAG CCGTTTCATC
GCTGGCCTGA AAAAAGCGTC CATCGAGATC GACCGTAAGG TTCTGGCTGA TCTGGCAGTG
AACGAAAAAG CGGCGTTTGC TGCGATTGTC GAGAAAGCTA AAGCCACCTT GGCTTAA
 
Protein sequence
MARVKRGVIA RKRHKKILKL AKGYYGARSR VFRVAKQAVI KAGQYAYRDR RQKKRQFRAL 
WIARINAGAR VNGLSYSRFI AGLKKASIEI DRKVLADLAV NEKAAFAAIV EKAKATLA