| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1907 |
|---|
| Symbol | |
|---|
| ID | 3716327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2180571 |
|---|
| End bp | 2181806 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_347639 |
|---|
| Protein GI | 77458134 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.551897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAT TACTGACCCG CCTGACCCTG GCGGTCGGGC TGGCTGTGCC TGTGTTGGCG
GCGCATGCGG ATGATCAGGT CAAGCGCGGC GAATACCTTG CCCGCGCGGC CGACTGCATG
GCGTGCCACA CGGCGCCAGG CGGTGCGCCG TTTGCCGGAG GCCTGCCGAT CGTGTCGCCG
TTCGGCACGA TCTACGGCAC CAACATCACT CCAAGCAAAG AGCACGGCAT CGGTTTGTAC
AATGATGACG AATTCTTCGC TGCGCTCACT GAGGGCAAGC GTCGTGACGG CGCGAACCTC
TATCCGGCGA TGCCGTACAC CTCCTACCAC TTGATGCCGC GTGCGGATTC GGATGCGATT
CATGCGTATC TGAAAACCGT CGAACCGATC GAGCGTGCAG CGCCGGTAAC GAGCCTGAGC
TTCCCGTTCA ACGTGCGTCC GGGCTTGATT GGCTGGAACA TGATGTATGG CAAAGCCTTG
AAGCTCGAAT CTGCCGAAGG CAAAAGCGAG GCGTGGAAAC GCGGCCAGTA CATGGTCGAA
GTGCTTGGCC ATTGCGGCGA ATGCCACACG CCGCGCGGCC TGCCGGGCGC GATGCAGTTG
GACAAGCGCC TGACCGGCGG CATCCTCAAC GGCTACCTGG CACCGAGCCT GCTCGCCACT
GATCTGGCGG CGCGCGGCTG GAACCATCAG GACCTGAGTA CGTTCCTCAA GCACGGCATG
AGCGCCCAGG GCACGATGTT CAACGAGATG TTTCCGGTGT TCCACAACAG CACTCAGGGT
CTGAATGATC CGGATCTGGC GGCGATGGCG ACTTTCCTGC TGGGCGACAA GCCTCCGGCG
GCGAAAGAGC TGACCGAAGT GCCGGTGGAA AAACTCAGTG CCAGCGCTCA ACGCGGCCGT
CAGGAATACT TGAATGTCTG CGCTGGCTGT CATGCGGCCG GTGGCGAAGG CAAACCGCAC
ATTGCGGTAG CCATGCGCGG CAACACCACG CTGCGCCTGG AAGATCCGCG CAACCTGTTG
CGAGTGATCG AGGACGGTAT CGGCGAACAG AAATTCGCCG GGTTCGAACA CATGCAGCCG
ATGCCGGGTT TTGCCGACAA GCTCAGTGCC GAACAACTGA CCGATCTGCT GAACTACCTG
CGTCAGGGGT GGGGTGGGCA GTCGGCCGAG CTGGCGGTCG GCGATGTGCA GAAGCTTCAG
GCTGATGCTC CGTCCATCGA GCACAAGGCG CACTGA
|
|---|
| Protein sequence | MKQLLTRLTL AVGLAVPVLA AHADDQVKRG EYLARAADCM ACHTAPGGAP FAGGLPIVSP
FGTIYGTNIT PSKEHGIGLY NDDEFFAALT EGKRRDGANL YPAMPYTSYH LMPRADSDAI
HAYLKTVEPI ERAAPVTSLS FPFNVRPGLI GWNMMYGKAL KLESAEGKSE AWKRGQYMVE
VLGHCGECHT PRGLPGAMQL DKRLTGGILN GYLAPSLLAT DLAARGWNHQ DLSTFLKHGM
SAQGTMFNEM FPVFHNSTQG LNDPDLAAMA TFLLGDKPPA AKELTEVPVE KLSASAQRGR
QEYLNVCAGC HAAGGEGKPH IAVAMRGNTT LRLEDPRNLL RVIEDGIGEQ KFAGFEHMQP
MPGFADKLSA EQLTDLLNYL RQGWGGQSAE LAVGDVQKLQ ADAPSIEHKA H
|
|---|
| |