Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1858 |
Symbol | |
ID | 3716372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2117242 |
End bp | 2117724 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | RNA polymerase sigma factor |
Protein accession | YP_347590 |
Protein GI | 77458085 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.598111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.760188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGAAA ACTACTATCG CGAGTTGGTG TGTTTCCTGA ACGCCAGGCT CGGCAACCGT CAGGTGGCCG AAGACGTGGT GCATGACGCT TATCTGCGGG TGCTGGAGCG ATCCAGCGAA ACGCCGATCG AGCAGCCTCG GGCATTTCTC TATCGCACCG CACTCAATCT GGTGATCGAC GACCATCGAC GCAATGCCCT GCGTCAGGTC GAATCGCTGG AAGTGCTCGA CAGCGAAGAG CGCTATTTCA CTCCATCCCC CCACAACACC TTCGATCACG GCCAGCGACT GGAGATGCTC CAGCGCGCCC TCGCTGAACT TTCGCCGCTG TGCCGCGAAA GTTTTCTGCT ACGCAAGATC GAAGGCCTGT CGCACCCCGA AATCGCCCAG CACCTCGGCA TTTCCAAGGC CCTGGTGGAA AAACACATCG TCAACGCCAT GAAGCATTGC CGCCTGCGCA TCAAGCAATG GGACGCCCAT TGA
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Protein sequence | MLENYYRELV CFLNARLGNR QVAEDVVHDA YLRVLERSSE TPIEQPRAFL YRTALNLVID DHRRNALRQV ESLEVLDSEE RYFTPSPHNT FDHGQRLEML QRALAELSPL CRESFLLRKI EGLSHPEIAQ HLGISKALVE KHIVNAMKHC RLRIKQWDAH
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