Gene Pfl01_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1858 
Symbol 
ID3716372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2117242 
End bp2117724 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content58% 
IMG OID 
ProductRNA polymerase sigma factor 
Protein accessionYP_347590 
Protein GI77458085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.598111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.760188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAA ACTACTATCG CGAGTTGGTG TGTTTCCTGA ACGCCAGGCT CGGCAACCGT 
CAGGTGGCCG AAGACGTGGT GCATGACGCT TATCTGCGGG TGCTGGAGCG ATCCAGCGAA
ACGCCGATCG AGCAGCCTCG GGCATTTCTC TATCGCACCG CACTCAATCT GGTGATCGAC
GACCATCGAC GCAATGCCCT GCGTCAGGTC GAATCGCTGG AAGTGCTCGA CAGCGAAGAG
CGCTATTTCA CTCCATCCCC CCACAACACC TTCGATCACG GCCAGCGACT GGAGATGCTC
CAGCGCGCCC TCGCTGAACT TTCGCCGCTG TGCCGCGAAA GTTTTCTGCT ACGCAAGATC
GAAGGCCTGT CGCACCCCGA AATCGCCCAG CACCTCGGCA TTTCCAAGGC CCTGGTGGAA
AAACACATCG TCAACGCCAT GAAGCATTGC CGCCTGCGCA TCAAGCAATG GGACGCCCAT
TGA
 
Protein sequence
MLENYYRELV CFLNARLGNR QVAEDVVHDA YLRVLERSSE TPIEQPRAFL YRTALNLVID 
DHRRNALRQV ESLEVLDSEE RYFTPSPHNT FDHGQRLEML QRALAELSPL CRESFLLRKI
EGLSHPEIAQ HLGISKALVE KHIVNAMKHC RLRIKQWDAH