Gene Pfl01_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1830 
Symbol 
ID3716383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2046259 
End bp2049126 
Gene Length2868 bp 
Protein Length955 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347562 
Protein GI77458057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGT ACCTTTTAAG TTTTGCAAGG CAGAATCTTG AGGGGCGCAC TGATGCTTAC 
CTGGTGCTTC TCTGGTGTAT GTACCAGGCT AACCAAAGCA AGGGCCGCTA CTCAGACCAC
ATCAAATCAC ACATCACCAC GGCGTCGGAT CAGCTGCTGG GTCGCAACTA CCAACGTGTC
GCTGCTCGCT TCAAGAAAGT GCTCGATAAA AGGCCTGAAC TAGATCGAAT ACCACCTTCG
GGCTTGGGGG CGTTGGATTA CCTTCGCGTC AAGAATTTCC GTGGCTTTGG GGAGTTTGGC
GCCGACGATA AAGGCACGTT CATTCGATTC AGTAAGCTGA AAAACATTTT CTACGCGCCC
AATGGTGGCG GTAAATCATC GCTCTGCGAA GCCATCGAAA TTTGCACCAC TGGGGACATC
AAGGAAGCCG CTAGGCGCAA GACCAAGGTC AAGCAGTACA TTGCACGTGG AGAAACCAAG
CCTCAGCTCG CTCTCTTGGG AACGAATAAG CTCAAAATTA CGCCCAGCAT CAGTTGGTCG
AGCTGTTTCA TTGATCGCAA TCGCCTTCAG GAGTTTTCGC TCCTGGGCTC CAAGGACACA
GGCAGTGGCG AAAGTGATGT CTTGGCCACC TTGTTCGGAT TGGAAGAGCT CCAAGAAGTC
ATTTCTCGTT TCGTCCGCCC TGAAAGCTTT ACGCTCAAAA CATTTATGCG TGCCGACCAG
GCGGAGGCGC TGCTGAACCT TGAACGCGCT CGAACAGAAC TAGGTCAACA GCGGCGCAAG
CACAGGGCAG ATCTTCAAGT TGCGATTTCG GAAACCTGTC AGCTATTGGG ACTGCGGTCT
GATCAGGATT TCGAAATTCG TCCAAAGGTA CAGCGGCTCC GCAAAAAGAT AGACATGCAT
ATCCGTGGGG CCGAGCGACT GCGAGCAGCC AAGGCACCAG TGGTCATTCC TGTGAAACGT
GTTGCACGTA CTTCTGCCAT CGCCAAGCGG TTGCTCAACC GCAGAACTCA GATCGAAACA
CTTTTTCTGC AAAGGGCCAG TGAAGTTAAC TATCGCGCTG TTTTTGAAGC CTTGGAAGCC
ATGGAACAAC AGTCTGAGCA GACCTGTCCT GCATGTTTGA CGCCACTTGA TCAGGTCACG
GTGAACCCCT TTGAAAGGGC TCGCGATCAG ATCAAAGCGC TCGGAGCCTT GGAGGCTCTG
AAGCAATCCA AGCTGAGAAA TGATGCTCAA GTTGTCTTGT GGGCTTCCAG GATCGCTACT
GGTATCAGTT CCGTGAAGGG TAATACCTAC GCTGATGTAC CCTGCTCACT GGCGATGGAC
GCGTTGGAAG CGGTGCTCGC AGAATTCCAT ACGGCCACTG ATCGCTCGAC AGTGGCAGCG
TCTGTCCTCA ATGCTTTCAT CGCGCTCTGT GCTGACAGTA CAGCCCAGAT CGAGGCCTAT
CTGCTCGCCT GCGAGCGTAA GCGGCGAGAG GTTGACCAGG CAGAAGTTCA AGCGGCCCGT
CTCAATGAGC TCATCGAACA CCTCAAGAAG GTAGATGAGT CGCTGAAGCG ACAGTTCGAC
ATCAAAACCC GTGCAGAAAC CGAGTTCAAA AACGCCAATA ACAGAATGCT TGCCTTGATG
GGGCAGAGAA CGGTTTTGCT CAACGATTCT GTGGATAACA GTCACTTCAA CCAATTGCTC
AAGGATCTTG AGGTTGAATA CCGAACGCTG TATGGCGACC TGCTGGATTA CAAGCTAGAG
CTCGAAAAAG CGCGCATTAC AGGGATCGAA GCCAAGGCTG CCGAGTACTA CCGAGCGATC
AATAACCATG ACGATGACCA TGAGCAGATA GAGACGCTGA ACTTTGAAAA GCTCTCGGAG
AGCTACCGGA TCAAGATCAA CAACGTGGAC GGATCTCTTC TGGATGCATT TGCTGTGCTC
AGCGAGGGGC ATCTGAGGGC ATTGGGCTTA TCGATTCTTC TGGCGATGGC TGAGAAAAAC
AATTTTCCGC TAATCGTCTT TGATGACGTC GTCAATGCGA TCGACACGGA TCACCGATCC
AACATCATTG ATCTGTTTTT CAATGACACT TACCTGCGTC GGATCCAGAT GGTGGTAACC
ACCCATGATC GCCTCTTCTG GGAGCGCTTC TGCATCATCG CTGACCGTCA TCCTCAATGC
GACCAGCACG CAAACCATGT GCTCAGCTAC ACGAACAAAG GCATCGTGGT GATTGATCAC
GCAGGCGGTT TCCAGAAAAA GGTGCACATG GCGTTGTCGG TCTTCGACGT TCGGCAAGCG
TTGCTGTATT GCCGGATCTG GTTCGAGTCC ATGGTGCTGG AGTTCTGCAT TGAAAACGGC
GTCCAGGTCA CCGCGAACTT CAACAAATCT CAGCTCAAGA AGAGTATGTA CCTGCAGGTG
AGCCTGGAGC ACACCTTCAA GCTAGTGGAG CCCTTCATTG ACTACGACCT ATCGTATTTC
AATTTTATCA AGAATGATCT GGTGAACTGG GGTGGCCAAA ATCAAGAACA TCATGCATTT
GATGAAGAAA GCCTGAACTT TGTGCACTCC AAGACCAGTG GTGAGGTTTC GAGAATCTAC
GACGCGATCC GTTTTCTGGA ATGTCAGCTT TTCATGGACA AAAAGAAGGA GTCCGGAGAA
AGGTACCTTG CAGAGGTGAA TGAGAAAGTC GAGAAGGGCC GCAGGAAATT AGCAGGACTC
GCCAGAGCAC CTGAAGAGGT GCAGAAAGAA CATCAGGCAG GGTTGAAGGC GTTGGAAAAG
CGCGCCCTTG AGCTCACCCA TGAGCTTCAG TTCATCGAGC GCTGTGTAGT GAGCATGGCT
GACCGCGAGC GAGCCGGGGA GCTGCCCGCT GAGTTGCCGC CTGCCTAG
 
Protein sequence
MSQYLLSFAR QNLEGRTDAY LVLLWCMYQA NQSKGRYSDH IKSHITTASD QLLGRNYQRV 
AARFKKVLDK RPELDRIPPS GLGALDYLRV KNFRGFGEFG ADDKGTFIRF SKLKNIFYAP
NGGGKSSLCE AIEICTTGDI KEAARRKTKV KQYIARGETK PQLALLGTNK LKITPSISWS
SCFIDRNRLQ EFSLLGSKDT GSGESDVLAT LFGLEELQEV ISRFVRPESF TLKTFMRADQ
AEALLNLERA RTELGQQRRK HRADLQVAIS ETCQLLGLRS DQDFEIRPKV QRLRKKIDMH
IRGAERLRAA KAPVVIPVKR VARTSAIAKR LLNRRTQIET LFLQRASEVN YRAVFEALEA
MEQQSEQTCP ACLTPLDQVT VNPFERARDQ IKALGALEAL KQSKLRNDAQ VVLWASRIAT
GISSVKGNTY ADVPCSLAMD ALEAVLAEFH TATDRSTVAA SVLNAFIALC ADSTAQIEAY
LLACERKRRE VDQAEVQAAR LNELIEHLKK VDESLKRQFD IKTRAETEFK NANNRMLALM
GQRTVLLNDS VDNSHFNQLL KDLEVEYRTL YGDLLDYKLE LEKARITGIE AKAAEYYRAI
NNHDDDHEQI ETLNFEKLSE SYRIKINNVD GSLLDAFAVL SEGHLRALGL SILLAMAEKN
NFPLIVFDDV VNAIDTDHRS NIIDLFFNDT YLRRIQMVVT THDRLFWERF CIIADRHPQC
DQHANHVLSY TNKGIVVIDH AGGFQKKVHM ALSVFDVRQA LLYCRIWFES MVLEFCIENG
VQVTANFNKS QLKKSMYLQV SLEHTFKLVE PFIDYDLSYF NFIKNDLVNW GGQNQEHHAF
DEESLNFVHS KTSGEVSRIY DAIRFLECQL FMDKKKESGE RYLAEVNEKV EKGRRKLAGL
ARAPEEVQKE HQAGLKALEK RALELTHELQ FIERCVVSMA DRERAGELPA ELPPA