Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1803 |
Symbol | |
ID | 3716564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2014556 |
End bp | 2016571 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_347535 |
Protein GI | 77458030 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.68857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAGTC TGGCCAGGAT CGACCCTGTA AGGTCCGCGT CCTGGCCGCG AGGTTTTATG CTCCCGGAAC ATTCCGATTT ATCCATCCCT GTGTTCTTGC CCGTCACGGA TGAAACCTGC GCGAACCTGT TGCAGGCGGG TGGTGCCAAA GCCCTCGAAA GCCTGACTGA TCCAGAGTTG GCGGCGGTGC TGGTCATCCA GAATCTGGTG CAGACGAAAG AGCAGGATCT CGGCGCCGTG GCGGTGGAGA AGATTCTGGC CAAGCTCTTG TCTTGGGCTG TCGATACTCG TCAGGCAACG ACCGCGAGCC TGCTGTCCGA AGCGCAGCGA CTGTTCGACC CGCGCAAACT GTATTTCGGC CTGAAGGTCC TGAATCCTCT GAATCTGCGT TTTCTGTTGG TCGAAGAAAT ATCGGCACGC GATTACCTAT TGCCCGACGG CCAGTGGGAT TTTGAATACA AGGTCCGGCG CCATCGCAGC CATGACCCGT TCAGCCAGCC GATCGTGACG CCCCGTTACC GCGAGCGCTG GTTAAGCCCG GCGCAGGACA AACTGGTCAG AACCTTCCGC GCCAATCTGG ACGAAGACCT GCACGTTCAG GGTTACGCGG GGATCGGCAA AAGCCATCTG TTGGTCGCTT TGCTGGAGCA CTTGCGCCCG GAAAAGACTT TATTGTTGGC GCGCACCCCG GCCAAGCTGG AGGTCCTTCG CCAGCGCATG ACAGGGCCGA GCGAGAAGAA GGCCGGCAAG ACCTTCCTGG CGTTTGCGCA GTCACTGATG CTCGGGCGCA GGCCTCAGGC TGAAGGGGCG ACTCGGATTC TGAGTCGACA GGCGCTGGCG CAGGAACTGA ATATCTACGG TTTCCACCAC CACGATGGAC AGGCGACCCT TGAACTCTGC CTCAAAGTGA TCGAGCGCTA TTGCCGCTTC CGCGATCACA CCTTTTCGGC GAAGCATCTG CCGCATTTCA ACCAGCCGCT CTCCAGCGTC GACGCTCAAG TGTTGCTGGA GTATTCGAGC CGGGTGTGGG GCTATCTAGA ACTCAACCCG GTGTGGGGCA GCCAGACCGG GTTCGAAGCG CTACTGATGA TCAAGCGCGC CTGCATCGCC GGTTGCGTGG TGCCAGCGCG CTACACCCAC GTGTTGATCG ATGAGAGCCA GGACATTCCC GGATCGCTGT TGCAGATTAT CGAACGCGGC CGCCAGGTGT TGATCACCCT CGGCGACGAG TACCAGCAGG CCAGTGGCGT GCCGGTCAAA CGGCACCGTG AGGTTCGCCA AAGCGATATC AGCTATTCCG TGCGCTCGGG TCGCAACGTC GAACGGCTGG TCAATCCGCT GATCGCCCGG CATTCGCAGA AGGGCAAGAT TCCGTTCGAA GGCGCCAGTG ACGCCGATGT TGTTATCAAG GAGTACCCGG AAGGTTTCGT ACCGTCCGAG GGTTGCGTGG TGCTGACGGC ATCGCCCTGG GACAGCATGA TCTGGGCCAT CCACCTGCAC GACTCCAACT GCAAGTTCAG ATTTCCGGAC AAGCGCACTC AGGATGAACT CAAGCATTTC ATGGCCACCG CCATCGAACT GTTCAAACCT GATTTCTACC GTTCCGAATT CAGCGAAAAC GGCGTGCATC CGTACTTCAG CGACCTGCCT GACTGGCAGG CCGTTTGTGA CGCCAATCAG TTCGACGAAT CATTTCTGCG GGTCAAGGCC AAGCTGGAAA ACGGCTTCAT GATCGCCGAC CTGACACGCT TGAACCGAAT GATCGACAAC GCCGGCAACG GCTGCCTGCT GATGCTCGCG GAAGAGGCGG GGGGCATGGA GTTCGACAAG GTCTTGCTGA CGCCGGGGTT GCTGACCAAC GAGAAATTCA AGGACGCCTA CGCGTTCGAT CAGCGGATCT GCGCCGTGTA CATCGCCATC TCTCGCGCCA GGCTGAAGCT TTACGTGCCG TACGATGTGG TTGAGTGGGT CGAGTATCAC GAGTACCAGC AGTTTCGTGA TACGGCTGGG CATTGA
|
Protein sequence | MKSLARIDPV RSASWPRGFM LPEHSDLSIP VFLPVTDETC ANLLQAGGAK ALESLTDPEL AAVLVIQNLV QTKEQDLGAV AVEKILAKLL SWAVDTRQAT TASLLSEAQR LFDPRKLYFG LKVLNPLNLR FLLVEEISAR DYLLPDGQWD FEYKVRRHRS HDPFSQPIVT PRYRERWLSP AQDKLVRTFR ANLDEDLHVQ GYAGIGKSHL LVALLEHLRP EKTLLLARTP AKLEVLRQRM TGPSEKKAGK TFLAFAQSLM LGRRPQAEGA TRILSRQALA QELNIYGFHH HDGQATLELC LKVIERYCRF RDHTFSAKHL PHFNQPLSSV DAQVLLEYSS RVWGYLELNP VWGSQTGFEA LLMIKRACIA GCVVPARYTH VLIDESQDIP GSLLQIIERG RQVLITLGDE YQQASGVPVK RHREVRQSDI SYSVRSGRNV ERLVNPLIAR HSQKGKIPFE GASDADVVIK EYPEGFVPSE GCVVLTASPW DSMIWAIHLH DSNCKFRFPD KRTQDELKHF MATAIELFKP DFYRSEFSEN GVHPYFSDLP DWQAVCDANQ FDESFLRVKA KLENGFMIAD LTRLNRMIDN AGNGCLLMLA EEAGGMEFDK VLLTPGLLTN EKFKDAYAFD QRICAVYIAI SRARLKLYVP YDVVEWVEYH EYQQFRDTAG H
|
| |