Gene Pfl01_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1802 
Symbol 
ID3716562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2013008 
End bp2014174 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347534 
Protein GI77458029 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.102564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGCT TTTTCGAGCA GCTCAGTTCC CGCATCGTCG CGCCGTTCAT GGGCGAATCC 
TCGCGCAACA GCAAAATCTG GCCGTGCCGC TGCGGCCAGT CGCTGTTCTT TCGCAACAGC
CAGTGCCTGG CCTGCAATGC GGCGCTGGGT TATCAACCGG AACACAGTCG CCTGACCTCG
CTGCAACCGG GGCCGCAAGA GGGCACCTGG ACGCTGGACG CCGACCCCGA AGCCGGGCTG
TTCCGACGTT GTGCCAACCT TGATACCCCG GCGGCCTGCA ACTGGCTGCT GCCCGCCAAC
GATCACTACA CCCTGTGCGC GGCCTGCGAT CTGAATCGCA CCATTCCCGA TCTGTCCGTC
CCGGAAAACC CCGAACGCTG GCGCAAGGTG GAAATCGCCA AGCGGCGACT GGTGGCGCAA
CTGATCAGCC TCGGTCTGCC GGTCGTTCCG AAAACCGTCG ACGAAGCCAC CGGCCTGGCC
TTCGATTTCA TCGGCGTCGA TCTGCAAGGC AACGCACCGA TGACCGGCCA CGCCAACGGC
CTGATCACTC TCGACATCGA AGAAGCCGAC GACGCCCACC GCGAGCGGGT CAGGGCGCAG
ATGCACGAAC CCTATCGCAC GCTGCTCGGG CATTTTCGCC ATGAGGTCGG GCACTACTAC
TGGGATCGCC TGATCGACAA CGGCCCGTGG CTCGGTTCAT TCCGCAACCT GTTCGGCGAC
GAACGCGCCA GTTATGCCGA GGCGCTGGAG CGACATTATC AACAAGGCGC GCCGGCGGAC
TGGTCGCAGC ACTACGTCAG CGCCTACGCC ACCATGCACC CGTGGGAAGA CTGGGCGGAA
ACCTGGGCGC ATTACCTGCA CATGATGGAC GCGGTGGATA CGGCGCTGGG TTTCGGCATG
AGTGCCCGGG AGATGGACCT GGATTACCAG CCATTTCCGC CGAGCACGCT GTACGACCCC
GAGCATCCCG GCGGCGCGGC GTTCCTGTCG TTCGTCAACG CGTGGATCGA ACTGGCCGGC
ATGCTCAACG AGCTGTCGCG CAGCATGGGC CAGCCGGATT TCTATCCCTT CGTCCTGCCG
CCGGCGGCGA TCGCCAAGCT GCACTTCATT CATCTGGTGA TCCAGCAAGA GGGCGGCCGC
GCGGACGAGG TGCTGCAGGC GCAATAG
 
Protein sequence
MYRFFEQLSS RIVAPFMGES SRNSKIWPCR CGQSLFFRNS QCLACNAALG YQPEHSRLTS 
LQPGPQEGTW TLDADPEAGL FRRCANLDTP AACNWLLPAN DHYTLCAACD LNRTIPDLSV
PENPERWRKV EIAKRRLVAQ LISLGLPVVP KTVDEATGLA FDFIGVDLQG NAPMTGHANG
LITLDIEEAD DAHRERVRAQ MHEPYRTLLG HFRHEVGHYY WDRLIDNGPW LGSFRNLFGD
ERASYAEALE RHYQQGAPAD WSQHYVSAYA TMHPWEDWAE TWAHYLHMMD AVDTALGFGM
SAREMDLDYQ PFPPSTLYDP EHPGGAAFLS FVNAWIELAG MLNELSRSMG QPDFYPFVLP
PAAIAKLHFI HLVIQQEGGR ADEVLQAQ