Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1800 |
Symbol | zipA |
ID | 3716560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2009628 |
End bp | 2010494 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | cell division protein ZipA |
Protein accession | YP_347532 |
Protein GI | 77458027 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000542289 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCG GTCTGCGCGA GTGGCTGATC GTCATCGGCA TCATTGTGAT AGCCGGTATT CTTTTCGATG GCTGGCGCCG TATGCGCGGC GGCAAGGGAA AACTGAAATT CCGTCTTGAC CGAAGTCTGT CCAACCTGCC GGACGAGGAC ACCAGCGCCG AGCTGTTGGG CCCGGCCCGC GTGCTGGATA CCCACAAAGA GCCGCAACTG GACGAACACG ATTTGCCATC GGTGAGTATG CCGGCCCGCG AAGCACGCGA GCCTCGCGAA TCCGGTTCCA AGCGCGGCAA GCGTGGCGGC AACGGTCCGG CCCAGGGCGA CCTGAACCTC GATCTGGATC TGGACGGCGG TCCGAGCTTC AGCAGCCGCG ACGATGATTT CGTCGAGCCT GCCGCCAAGT CGTCGCCGGC AGTGGCCGAC AAGGATCAGC CGCAAGCCGA AGAAGTGCTG GTGATCAGCG TGATCTGCCG CGACCCGGCC GGCTTCAAGG GCCCGGCACT GCTGCAGAAC ATTCTGGAAA GCGGTCTGCG TTTCGGCGAG ATGGATATCT TCCACCGTCA CGAAAGCATG GCCGGCAACG GTGAAGTGCT GTTCTCCATG GCCAACGCGG TCAAGCCGGG CATCTTCGAT CTGGACGACA TCGACCATTT CAGCACCCCG GCGGTGAGCT TCTTCCTCGG CCTGCCAGGC CCGCGTCATC CGAAGCAGGC CTTCGACGTG ATGGTCGCGG CAGCCCGCAA GCTGTCCCAG GAGCTGAACG GCGAATTGAA AGATGACCAG CGCAGCGTCC TGACCGCGCA GACCATCGAG CACTACCGTC AGCGCATCGT CGAATTCGAA CGTCGCGCCC TGACCCAGAA GCGTTGA
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Protein sequence | MEIGLREWLI VIGIIVIAGI LFDGWRRMRG GKGKLKFRLD RSLSNLPDED TSAELLGPAR VLDTHKEPQL DEHDLPSVSM PAREAREPRE SGSKRGKRGG NGPAQGDLNL DLDLDGGPSF SSRDDDFVEP AAKSSPAVAD KDQPQAEEVL VISVICRDPA GFKGPALLQN ILESGLRFGE MDIFHRHESM AGNGEVLFSM ANAVKPGIFD LDDIDHFSTP AVSFFLGLPG PRHPKQAFDV MVAAARKLSQ ELNGELKDDQ RSVLTAQTIE HYRQRIVEFE RRALTQKR
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