Gene Pfl01_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1785 
Symbol 
ID3716583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1986184 
End bp1987395 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content65% 
IMG OID 
Productnitrate-binding protein NasS, putative 
Protein accessionYP_347517 
Protein GI77458012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAA CCTCCGCCGG GCCGCTGGCC TGGGTCAACG GCAGCGATGC CCCGGAAAAA 
AGTGCGATCA ACCTGGGCTT CATGGCCCTG AGCGACTGCG CCTCGCTGGT GGTCGCCGCC
ACCCAGGGCT TTGCTCAGCC TTACGGGTTG ACCCTGAATC TCAAACGCCA GAGTTCCTGG
GCCAACCTGC GGGACAATCT GGTCAGCGGT GAACTCGATG CCGCCCACAG CCTTTACGGC
CTGATCTACG CAGTGCATCT GGGCATCGGC GGCGTCGCGC CGACCGACAT GGCGGTGCTG
ATGGGTCTGA ACCAGAATGG TCAGAGCCTC AACCTGTCCC ACGGCTTGCA GGGCCTGGGC
GTGACCGGTC CTGAAGCGCT GCACCACCAT GTGCACCAAA CCCGCGCAAA ACTGACCTTC
GCCCAGACTT TCCCGACCGG CACCCATGCC ATGTGGCTGT ATTACTGGCT GGCGAGCCAG
GGCATTCATC CGTTGCGGGA TGTCGACAGC GTGGTGGTGC CGCCGCCGCA AATGGTCGCG
CACTTGCAGG CCGGACGCAT TGATGGCTTC TGTGTCGGCG AGCCGTGGGC GGCCAGCGCC
GTGCAACAGA GTCTCGGCTT CACGCTGGCC ACCAGCCAGA CCATCTGGCC CGATCACCCG
GAAAAAGTCC TCGGCTGCAC CCGCGCCTTC GTCGAGCAGT ACCCCAACAC CGCCCGGGCG
CTGGTGATGG CGATCCTCGA AGCCAGCCGC TTCATTGAAG AAAGCCCGGA AAACCGCCGC
AGCACCGCGC AGTTGCTGAG CGCTGCGGAA TACCTCGACG CCCCGGTGTC CTGCATCGAA
CCGCGCTTTC TCGGCGATTA CGACGATGGA CTGGGCAATC GCTGGCAGGA CCCGCACGCC
CTGCGCTTTC ACGGCGATGG CGCGGTGAAT CTGCCGTATC TGTCGGATGG CATGTGGTTC
ATGACCCAGT TCCGCCGCTG GGGCTTGCTG CGCGATGACC CGGATTACCT CGCTGTCGCC
CGGCAGGTGC AACAACTGGA GATCTATCGC GACGCGGCAA CTGCCGTGGG CGTCGCGCCA
TGGGGCAAGG ACATGCGCAG CAGCCAGTTG ATCGACGGCA AAATCTGGGA CGGCAGCGAT
CCTGCCGCCT ACGCCCGAAG CTTCAAGCTC CACGCGCTGA GCGACAGCGC CACCCTTCTC
GCCCAGCGCT GA
 
Protein sequence
MTQTSAGPLA WVNGSDAPEK SAINLGFMAL SDCASLVVAA TQGFAQPYGL TLNLKRQSSW 
ANLRDNLVSG ELDAAHSLYG LIYAVHLGIG GVAPTDMAVL MGLNQNGQSL NLSHGLQGLG
VTGPEALHHH VHQTRAKLTF AQTFPTGTHA MWLYYWLASQ GIHPLRDVDS VVVPPPQMVA
HLQAGRIDGF CVGEPWAASA VQQSLGFTLA TSQTIWPDHP EKVLGCTRAF VEQYPNTARA
LVMAILEASR FIEESPENRR STAQLLSAAE YLDAPVSCIE PRFLGDYDDG LGNRWQDPHA
LRFHGDGAVN LPYLSDGMWF MTQFRRWGLL RDDPDYLAVA RQVQQLEIYR DAATAVGVAP
WGKDMRSSQL IDGKIWDGSD PAAYARSFKL HALSDSATLL AQR