| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1775 |
|---|
| Symbol | |
|---|
| ID | 3716573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1973203 |
|---|
| End bp | 1974027 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | TM helix protein |
|---|
| Protein accession | YP_347507 |
|---|
| Protein GI | 77458002 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00313113 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTG ATCTCTGGAC TCAGAGCCTC GTCACTGCAA TGACTGCGTT GTGGACCAAA
GTCGCTAACT TCATTCCGAA CCTGTTCGGC GCACTGGTTG TGTTGCTATT GGGTTTTGTC
GTGGCCAAGC TGCTGGACAC CTTGCTGTCC AAATTGCTGG CCAAACTGGG GCTTGATCGC
CTGATGGGCG GCACCGGCCT GACCAAATTG ATGTCCCGCG CGGGGCTGCA AGTGCCGATC
TCCACGTTGA TCGGTAAAAT CGTCTATTGG TTCGTTCTGC TGATTTTTCT GGTTTCGGCA
GCAGAATCCC TTGGACTTGA GCGAGTTTCA GCTACGCTTG ACATGCTCGC GCTGTATTTG
CCAAAAGTGT TCGGCGCGGC GCTGGTGTTG CTGGTGGGTG TCCTTCTTGC GCAACTGGCC
AATGGCCTGG TTCGCGGGGC GGCAGAAGGC GTAGGCCTGG ACTACGCTTC CGGCCTTGGG
CGAATTGCCC AGGGCTTGGT GATCATCATC AGCATTTCGG TCGCGATCAG TCAGCTGGAG
GTCAAGACCG ACCTGCTGAA CCATGTGATC GTCATCGTAT TGATTACCGT TGGTCTGGCG
GTTGCGCTGG CCATGGGCTT GGGAAGCCGG GAAATTGCCG GTCAGATTCT TGCGGGAATC
TATGTGCGTG AGTTGTATCA GGTTGGGCAA CAAGTGCGTA TTGGCGAGGT CGAAGGCCAG
ATCGAAGAGA TCGGCACGGT TAAGACCACA TTGCTGACCG ATGAGGGTGA GCTAGTCTCT
CTCTCCAATC GGATCCTGCT GGAGCAGCAT GTGAGTAGCC GCTAA
|
|---|
| Protein sequence | MELDLWTQSL VTAMTALWTK VANFIPNLFG ALVVLLLGFV VAKLLDTLLS KLLAKLGLDR
LMGGTGLTKL MSRAGLQVPI STLIGKIVYW FVLLIFLVSA AESLGLERVS ATLDMLALYL
PKVFGAALVL LVGVLLAQLA NGLVRGAAEG VGLDYASGLG RIAQGLVIII SISVAISQLE
VKTDLLNHVI VIVLITVGLA VALAMGLGSR EIAGQILAGI YVRELYQVGQ QVRIGEVEGQ
IEEIGTVKTT LLTDEGELVS LSNRILLEQH VSSR
|
|---|
| |