| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1764 |
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| Symbol | prpB |
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| ID | 3716601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1959137 |
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| End bp | 1960027 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_347496 |
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| Protein GI | 77457991 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.662627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTCCA ACAAGAGCAC TCCAGGCCAG CGTTTCCGCG ATGCGGTCGC CAGCGAACAT
CCGCTGCAAG TGGTCGGCGC GATCAACGCC AACCACGCGC TGCTGGCCAA GCGCGCCGGT
TTCAAGGCGA TCTACCTGTC GGGTGGCGGG GTGGCGGCCG GCTCCCTCGG CGTGCCGGAC
CTGGGCATCA CCGGCCTGGA TGACGTGCTG ACAGACGTGC GCCGCATCAC CGACGTCTGC
GACCTGCCGC TGCTGGTGGA CGTGGACACC GGTTTCGGAG CCTCGGCGTT CAACGTGGCC
CGCACCGTCA AGTCGATGAT CAAGTTCGGC GCGGCGGCGA TTCACATCGA AGACCAGGTC
GGCGCCAAGC GCTGCGGCCA CCGTCCGAAC AAAGAAATCG TGACCCAGCA GGAAATGGTC
GACCGCATCA AGGCCGCCGT CGATGCCCGC ACCGACGACA GCTTCGTGAT CATGGCCCGC
ACCGATGCGC TGGCCGTTGA GGGTCTGGAA TCGGCACTGG ATCGCGCCGC CGCGTGCATC
GAGGCCGGCG CCGACATGAT CTTCCCGGAA GCCATCACTG AGCTTGAGAT GTACAAGCTG
TTCGCCAGCC GCGTGAAAGC GCCGATTCTG GCCAACATCA CCGAATTCGG CTCGACGCCG
CTGTACACCA CCGAGCAACT GGCGGGCGCC GACGTTTCGC TGGTGCTGTA CCCGCTATCG
GCGTTCCGCG CGATGAACAA GGCTGCGGAA AACGTCTACA CCGCGATCCG CCGCGACGGC
ACCCAACAGA ATGTCATCGA CACCATGCAG ACTCGCATGG AGCTTTACGA TCGCATCGAT
TACCACACCT TCGAGCAGAA GCTCGACGCG TTGTTTGCGG CGAAGAAGTA A
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| Protein sequence | MSSNKSTPGQ RFRDAVASEH PLQVVGAINA NHALLAKRAG FKAIYLSGGG VAAGSLGVPD
LGITGLDDVL TDVRRITDVC DLPLLVDVDT GFGASAFNVA RTVKSMIKFG AAAIHIEDQV
GAKRCGHRPN KEIVTQQEMV DRIKAAVDAR TDDSFVIMAR TDALAVEGLE SALDRAAACI
EAGADMIFPE AITELEMYKL FASRVKAPIL ANITEFGSTP LYTTEQLAGA DVSLVLYPLS
AFRAMNKAAE NVYTAIRRDG TQQNVIDTMQ TRMELYDRID YHTFEQKLDA LFAAKK
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