Gene Pfl01_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1701 
Symbol 
ID3716691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1896923 
End bp1898281 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content63% 
IMG OID 
Productxanthine/uracil permease 
Protein accessionYP_347433 
Protein GI77457928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.226413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGC TGTCCAAAGC GCGCATCCCC GACGCACCCG CCATTCAGCG CTTGCCCCTT 
TTGCAACTGA TCCTGGTCGG TTTGCAACAT GTACTGCTGA TGTACGGCGG CGCCATCGCG
GTACCGTTGA TCATTGGACA GGCCGCTGGC CTGAGTCGTG AAGAAATCGC CTTCCTGATC
AACGCCGACC TGCTGGTCGC CGGCATCGCC ACCATCGTGC AGTCCCTGGG GATCGGCCCG
ATGGGCATAC GCATGCCGGT GATGATGGGC GCCAGTTTCG CCGCCGTCGG CAGCATGGTC
GCCATGGCCG GCATGCCCGG CATCGGTCTG CAGGGAATCT TCGGCGCCAC CATCGCCGCC
GGGTTCTTCG GCATGATCAT CGCGCCGTTC ATGTCCAAGG TCGTGCGCTT CTTCCCTCCC
CTGGTGACCG GCACGGTCAT CACCTCGATC GGTTTATCGT TGTTCCCCGT GGCCGTAAAC
TGGGCCGGTG GCGGCGCTGG CGCCGCACAA TTCGGTTCAC CGATTTACCT GGCCATCGCC
GCACTGGTGC TGGCCACCAT TCTGTTGATC CACCGCTTCA TGCGTGGTTT CTGGGTCAAC
ATTTCCGTAC TGATCGGCAT GTGCCTGGGC TACGTGCTCT GCGGCGCCAT CGGCATGGTC
GACCTGAGCG GCATGGCCAA CGCGCCGTGG GTTCAGTTCG TCACCCCGCT GCATTTCGGC
ATGCCGAAGT TCGAACTGGC ACCGATCCTG TCGATGTGCC TGGTGGTGGT GATCATCTTC
GTCGAGTCCA CCGGTATGTT CCTCGCACTG GGCAAAATCA CCGGCCAGGA AGTCTGCCCG
CGCATGCTGC GTCGCGGCCT GCTGTGTGAT GCCGGCGCAT CGTTCTTCGC CGGCTTCTTC
AACACCTTCA CCCACTCCTC CTTCGCGCAG AACATCGGTC TGGTGCAGAT GACCGGCGTG
CGCTGCCGTT CGGTGACCAT CGTTGCCGGT GGTTTGCTGA TCGTCCTGAG CCTGCTGCCG
AAAGCGGCGT TCCTGGTGGC ATCGATTCCA CCGGCGGTGC TCGGCGGCGC AGCGATTGCG
ATGTTCGGCA TGGTGGCCGC CACCGGCATC AAGATCCTGC AAGAGGCCGA CATCGGCGAC
CGTCGCAACC AATTGCTGGT AGCCGTGAGC ATCGGCATGG GCCTGATCCC GGTGGTGCGT
CCGGAATTCT TCGCCCACCT GCCGTTGTGG ATGAGCCCGA TCACCCACAG CGGGATCGCC
ATGGCCACCC TCAGCGCGCT GACGCTGAAC CTGTTGTTCA ACATCCTCGG CGGCGCCGAA
CGCGCAGCGA TCAACGACTG CCACGCACAC CCGCACTGA
 
Protein sequence
MSELSKARIP DAPAIQRLPL LQLILVGLQH VLLMYGGAIA VPLIIGQAAG LSREEIAFLI 
NADLLVAGIA TIVQSLGIGP MGIRMPVMMG ASFAAVGSMV AMAGMPGIGL QGIFGATIAA
GFFGMIIAPF MSKVVRFFPP LVTGTVITSI GLSLFPVAVN WAGGGAGAAQ FGSPIYLAIA
ALVLATILLI HRFMRGFWVN ISVLIGMCLG YVLCGAIGMV DLSGMANAPW VQFVTPLHFG
MPKFELAPIL SMCLVVVIIF VESTGMFLAL GKITGQEVCP RMLRRGLLCD AGASFFAGFF
NTFTHSSFAQ NIGLVQMTGV RCRSVTIVAG GLLIVLSLLP KAAFLVASIP PAVLGGAAIA
MFGMVAATGI KILQEADIGD RRNQLLVAVS IGMGLIPVVR PEFFAHLPLW MSPITHSGIA
MATLSALTLN LLFNILGGAE RAAINDCHAH PH