Gene Pfl01_1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1682 
Symbol 
ID3716653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1878580 
End bp1879569 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID 
ProductABC transporter-like 
Protein accessionYP_347414 
Protein GI77457909 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.677404 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATG TCAGCGTCCA ACACCTTCAG AAAAACTACG CCGGCACCAC CGTGTTCAGC 
GACATCAACT GCGAAATCCA GAAGGGCGAA TTCGTCACCC TGCTCGGCCC GTCCGGTTGC
GGAAAATCCA CCCTGCTGCG CTGCATTGCC GGCCTGACGC CGGTGGATGG CGGCAAGATT
CTGCTCGATG GTGTCGACAT CGTGCCGCTC ACCCCGCAGA AACGCGGGAT CGGCATGGTG
TTCCAGAGCT ATGCGCTGTT CCCCAACATG ACCGTCGAAC AGAACGTCGC CTTCGGTTTG
CGCATGCAAA AGGTCAATGC CGACGACAGC CACAAGCGGG TTGCCGAGGT GTTGAAATTG
GTTGAACTCA ACGATTTCGC CAGCCGCTAT CCGCATCAGC TGTCCGGCGG TCAGTGCCAG
CGTGTCGCCC TCGCCCGCTC GCTGGTGACC CGTCCGCGCC TGTTGCTGCT GGATGAACCG
CTGTCGGCCC TCGATGCACG GATTCGCAAA CACTTGCGCG AACAGATCCG TCAGATCCAG
CGCGAACTCG GCCTGACCAC GATTTTCGTC ACTCACGATC AGGAAGAAGC CCTGACCATG
TCTGACCGGA TTTTCCTGAT GAATCAGGGA AAGATCGTAC AAAGCGGCGA CGCCGAAACC
CTCTACACCG CCCCGGTCGA CGTATTCGCC GCCGGCTTCA TCGGCAACTA CAACCTGCTG
GATGCGGAGA GTGCGTCGAA ACTGTTGCAG CGGCCGATCA ACCACCGCAT CGCGATCCGC
CCGGAGGCCA TCGAATTGAG CCTCAGCGGC GAGCCCGATG CGCAGATTCG CAGCCACAGC
CTGCTGGGCA ACGTGATTCG CTACCGCGTC GAAGCCCGGG GCGTGGAACT GGTGGTGGAT
GTGCTCAACC GCTCGGCGGC GGATCTGCAT CCCGACGGTC AGCGCCTGTC ACTTTCCATC
GATCCCACCG CCCTGTGTGA GGTAGCCTGA
 
Protein sequence
MSYVSVQHLQ KNYAGTTVFS DINCEIQKGE FVTLLGPSGC GKSTLLRCIA GLTPVDGGKI 
LLDGVDIVPL TPQKRGIGMV FQSYALFPNM TVEQNVAFGL RMQKVNADDS HKRVAEVLKL
VELNDFASRY PHQLSGGQCQ RVALARSLVT RPRLLLLDEP LSALDARIRK HLREQIRQIQ
RELGLTTIFV THDQEEALTM SDRIFLMNQG KIVQSGDAET LYTAPVDVFA AGFIGNYNLL
DAESASKLLQ RPINHRIAIR PEAIELSLSG EPDAQIRSHS LLGNVIRYRV EARGVELVVD
VLNRSAADLH PDGQRLSLSI DPTALCEVA