Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1681 |
Symbol | |
ID | 3716652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1877892 |
End bp | 1878545 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | HAD family hydrolase |
Protein accession | YP_347413 |
Protein GI | 77457908 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.786603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTGG CAATTTTTGA TCTGGACGAA ACCCTGATCC ACGGCGACTG CGCCACCCTC TGGAGCGAGC AGATGGGGCG CCTGGGCTGG GTCGATCCCG AGTCGTTCAT GCGCCGGAAC AACGAGCTGA TGGACGCCTA CAGCCATGGC AAGTTGCGCA TGGAAGACTA CATGGACTTC AGCCTCGAAC CGCTGATCGG TCGCACCCCG GAGGAAGTCG AGCACTTGGT TGGCCCATGG GTTGAGGATT TCATCGAGCC GATCATCTTC AGCGACGCCA CCAAAACCAT CGCTGCCCAT CGCAAGGCCG GTGACCGGAT TCTGGTGATC TCGGCCTCGG GCACGCACCT GGTCAAACCG ATTGCCGATC GACTGGGCAT CGACGAGGTG CTGGGAATCG AACTGGAAGT GGCGCATGGC GTGTACAGCG GCCACACCGT GGGCACCCTG ACCTACCGCG AAGGCAAGAT CACCCGCTTG CTGGAATGGC TGGATGCCGA AGAAGAAAAT CTTGAGGGCG CGAGTTTCTA TTCCGACTCA CGCAATGATC TGCCGCTGCT GCTGAAGGTG GATTACCCGC ATGTGGTCAA TCCGGATCCG GTGTTGCTGG CAGAGGCCGA GAAGTCCGGC TGGCCGATCC ACCTCTGGAA GTAA
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Protein sequence | MALAIFDLDE TLIHGDCATL WSEQMGRLGW VDPESFMRRN NELMDAYSHG KLRMEDYMDF SLEPLIGRTP EEVEHLVGPW VEDFIEPIIF SDATKTIAAH RKAGDRILVI SASGTHLVKP IADRLGIDEV LGIELEVAHG VYSGHTVGTL TYREGKITRL LEWLDAEEEN LEGASFYSDS RNDLPLLLKV DYPHVVNPDP VLLAEAEKSG WPIHLWK
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