Gene Pfl01_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1681 
Symbol 
ID3716652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1877892 
End bp1878545 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content60% 
IMG OID 
ProductHAD family hydrolase 
Protein accessionYP_347413 
Protein GI77457908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.786603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGG CAATTTTTGA TCTGGACGAA ACCCTGATCC ACGGCGACTG CGCCACCCTC 
TGGAGCGAGC AGATGGGGCG CCTGGGCTGG GTCGATCCCG AGTCGTTCAT GCGCCGGAAC
AACGAGCTGA TGGACGCCTA CAGCCATGGC AAGTTGCGCA TGGAAGACTA CATGGACTTC
AGCCTCGAAC CGCTGATCGG TCGCACCCCG GAGGAAGTCG AGCACTTGGT TGGCCCATGG
GTTGAGGATT TCATCGAGCC GATCATCTTC AGCGACGCCA CCAAAACCAT CGCTGCCCAT
CGCAAGGCCG GTGACCGGAT TCTGGTGATC TCGGCCTCGG GCACGCACCT GGTCAAACCG
ATTGCCGATC GACTGGGCAT CGACGAGGTG CTGGGAATCG AACTGGAAGT GGCGCATGGC
GTGTACAGCG GCCACACCGT GGGCACCCTG ACCTACCGCG AAGGCAAGAT CACCCGCTTG
CTGGAATGGC TGGATGCCGA AGAAGAAAAT CTTGAGGGCG CGAGTTTCTA TTCCGACTCA
CGCAATGATC TGCCGCTGCT GCTGAAGGTG GATTACCCGC ATGTGGTCAA TCCGGATCCG
GTGTTGCTGG CAGAGGCCGA GAAGTCCGGC TGGCCGATCC ACCTCTGGAA GTAA
 
Protein sequence
MALAIFDLDE TLIHGDCATL WSEQMGRLGW VDPESFMRRN NELMDAYSHG KLRMEDYMDF 
SLEPLIGRTP EEVEHLVGPW VEDFIEPIIF SDATKTIAAH RKAGDRILVI SASGTHLVKP
IADRLGIDEV LGIELEVAHG VYSGHTVGTL TYREGKITRL LEWLDAEEEN LEGASFYSDS
RNDLPLLLKV DYPHVVNPDP VLLAEAEKSG WPIHLWK