| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1678 |
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| Symbol | |
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| ID | 3716649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 1872693 |
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| End bp | 1874483 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_347410 |
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| Protein GI | 77457905 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.684126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.910388 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGA CCGAACAGCT GAGTGCCTTG AGCTCGATCC TGACTCAAAG CGGATTACAC
AGCCTGTTCC AGCCGATCAT TTGCCTCTCC GAACGGCGCA TCCTCGGCTA CGAAGCCCTG
ACCCGCGGCC CGTCCAACAG CCCGCTGCAC TCCCCCATCG CCCTGTTCGC CGTGGCCCGT
CAGGCCGGAC GCTTGAGCGA ACTGGAAATC GCCTGCCGCC AAAGCGCCTG TCGCCGTTTC
AACGAACAGC AGTTGCCGGG CAAGCTGTTT CTCAACGTCT CTCCCGAATC CTTGCTTGAA
GCCGCGCACC AGCCGGGGCG CACGCTGCAG CTGCTTCAGG ATTTCGGCAT TCCACCGAGT
CAGGTGGTGA TCGAACTCAC CGAGCAGACG CCAATCGATG ATTTCCAGTT GCTGCAAACC
GCACTGCATC ACTATCGGGC GATGGGGTTT TCGATCGCCC TCGATGATCT TGGGGCCGGT
TATTCGAGCC TGCGCCTGTG GTCGGAACTG CGGCCGGACT ACGTGAAGAT TGACCGGCAC
TTTATCGACG GCATCCATCA GGATGCGTTG AAACGAGAGT TCGTTGGATC GATCCTGCAA
ATCGCCAAGG CCTCGCGAGC TCAAGTGATT GCCGAAGGCA TCGAGTTGCC GGAAGAGCTG
GCAGTGCTGA CCGAGATGGG TGTGGATCTG GTGCAGGGCT ATCTGCTCGG CCGCCCTCAG
GAACACCCGC CGCGCGATGC TCGCGCCTTG ATGCCCAAGC ACGACAGCAG CGCCGTGGCG
CTGAACGATG AAGGCAGCGA CCTCAGTGCC CTGCTCAACG ATCAACCGGC CGTGAATCGC
GACACGCCGA CCGCCACCGT ACTGGAAGCC TTCCGCCGTC AGGCCAACCT CAACTCGCTG
GCGGTGCTCG ACGAACAGGG TCAGCCGTGC GGCATCGTTC ATCGTCACTC GTTATCCGAT
GCGCTGCTCA AACCGTTCGC CACCGACCTG TTCGCCCGCA AACCGATCAG CCGCCTGATG
AACGACGACT TCCTCGCCGT GGAAATGAGC CAGTCGCTGC AACAGGTCAG CCGCCTGATC
ACCAGCCGCG CCCGGCAACG CATCGAAGAA GACTTCATCA TCACCCTCAA CGGCGGTTAC
CTGGGCCTGG GCCGGGTGAT TGACGTGCTG AAGCTGATTA CCGAACTGAA GATCCAGCAG
GCGCGCTATG CCAATCCGCT GACCTTGTTG CCGGGGAATG TGCCGATTCA GCAATGTTTG
ACGAGGTTGC TGCAACAGGG GCGCGAGTCG GTTATCTGCT ATGTCGACAT CGACAGCTTC
AAACCCTTTA ACGATATCTA TGGGTATGGA CGTGGGGATG AAGTGCTGCT GTGTCTGGCG
CAATGCCTCA ACGAACGCGT CGACCCGTCC CGCGATTTCG TCGGGCATAT CGGAGGGGAT
GATTTCCTGT TGGTGCTCGG CCCGGAGGAT TGGCGCAAAC GGCTGAATCA ATTGCTTGAG
GATTTCCAGA GTCAATGCCG ACGCTTCTAC CGCCCCGAAC ATCTTGAAGC TGGGTGTTTT
GTTGCGCCGA ACCGCCAGGG TATTCGTCAG GAGTTTCCGT TGTTGTCACT GTCCATTGGC
GTGGTGCATC TGCATCCTGA AGCGTGTGCG CAGCTGGATG CGAGTCAGTT GGCGGACATG
GCATCGCAGG CGAAGCATCA TGCGAAGAAT GTTCCGGGGT ATAGCGTGCA TTTGATTGAT
AGCCTTTCCC TGTCTAACCT CCATCAATTA AAGACAATCG AGCAGTTCTG A
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| Protein sequence | MTTTEQLSAL SSILTQSGLH SLFQPIICLS ERRILGYEAL TRGPSNSPLH SPIALFAVAR
QAGRLSELEI ACRQSACRRF NEQQLPGKLF LNVSPESLLE AAHQPGRTLQ LLQDFGIPPS
QVVIELTEQT PIDDFQLLQT ALHHYRAMGF SIALDDLGAG YSSLRLWSEL RPDYVKIDRH
FIDGIHQDAL KREFVGSILQ IAKASRAQVI AEGIELPEEL AVLTEMGVDL VQGYLLGRPQ
EHPPRDARAL MPKHDSSAVA LNDEGSDLSA LLNDQPAVNR DTPTATVLEA FRRQANLNSL
AVLDEQGQPC GIVHRHSLSD ALLKPFATDL FARKPISRLM NDDFLAVEMS QSLQQVSRLI
TSRARQRIEE DFIITLNGGY LGLGRVIDVL KLITELKIQQ ARYANPLTLL PGNVPIQQCL
TRLLQQGRES VICYVDIDSF KPFNDIYGYG RGDEVLLCLA QCLNERVDPS RDFVGHIGGD
DFLLVLGPED WRKRLNQLLE DFQSQCRRFY RPEHLEAGCF VAPNRQGIRQ EFPLLSLSIG
VVHLHPEACA QLDASQLADM ASQAKHHAKN VPGYSVHLID SLSLSNLHQL KTIEQF
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