Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1659 |
Symbol | |
ID | 3716793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1847499 |
End bp | 1848977 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_347391 |
Protein GI | 77457886 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000440717 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00162326 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGGCGATGG ACTTGACCAG CATCCTGCTG GGGCTGGCAG GCGCAGCCGT GCCGCTGCTG GCACTGGCCT GGCAACTGCA ACGTCGGGCC AGTCAGAATC AGTCTGAAGT CGCGTTGCTC GAAGAGCGGC TGGCCATGGC GCAACTGGCC CAGGACGGCC TTACTGCGCA GCTCGAAGCC TGCCGCGATG AAATCGCCGA CCTCGGCCAG GCCAACGCCT CCAAACAAGC GGATCTCGCG GCTGTGCGCC GAGAGGTCGA GCTGCTGCAG ATCGAGCGCG ATGACGCCCG TGACGCCGCC CACGCCTGGA ACCTCGAACG CGCCAACAAG GAAGCTGAAT TGCGCCGCCT GGACGCCCAG GCCGCTTCGC TGAATGCCGA GTTGCGCGAG CAACAGGAGA GCCATCAACA ACGCCTGGAT GACCTGCAAG GTTCCCGCGA CGAGCTTCGC GCGCAGTTCG CCGAACTGGC CGGCAAGATC TTCGATGAGC GTGAACAACG TTTCGCCGAA ACCAGCCAGC AACGCCTCGG CCAATTGCTC GATCCGTTGA AGGAGCGCAT CCAGTCGTTC GAAAAACGCG TCGAGGAAAG CTACCAGGCC GAAGCCCGCG AGCGTTTTTC GCTGGCCAAG GAACTGGAAC GCTTGCAACA ACTGAATCTG CGCCTGAGCG ATGAAGCGAC CAACCTGACC CGCGCTCTGA AGGGCCAGAA AACCCAGGGC AACTGGGGCG AGCTGATTCT CGAGCGCGTG CTTGAGCATG CCGGGCTGGA GAAGGGGCGC GAGTACCAGA CCCAGGTCAA TCTCAAGGGG CCGGATGGCG AGCGTTTCCA GCCGGACGTG ATCATTTATC TGCCGGGCGA CAAGCAGGTG GTGGTCGACT CCAAGGTCAG CCTCACCGCC TATCAGCAAT ACGTCGCCGC TGACGACGAT GCCATCGGCC AGATCGCCAT GAAACAGCAC GTGCTGTCCC TGCGCAGCCA CGTCAAAGGC CTGGCCGGCA AGGATTACAA ACGTCTGGAA GGCTTGCACA GCCTCGATTT CGTCTTGCTG TTCGTGCCCA TCGAAGCGGC GTTTTCCGCT GCGTTGCAGG CTGAGCCGGC GCTGTTTCAG GAAGCATTCG ACCGCAACAT CGTGATTGTC AGCCCGACCA CACTGCTGGC AACGCTGCGG GTCATCGACA GTCTGTGGAA GCAGGAACGC CAGAGCCAGA ATGCCCGGGA AATCGCCGAG CGCGCCGGCT GGCTGTACGA CAAGTTCGTG TTGTTCATTC AGGATCTGGA CGAAGTCGGC AATCGCTTGC AGCAACTGGA CAAGGCCTAC AGCGCGGCGC GCAACAAGCT GACGGAAGGG CGCGGCAACC TGGTCAGCCG CAGCGAGCAG CTCAAGTTGC TCGGCGCGCG GGCCAGCAAA AGCTTGCCGG CGGATCTGCT GGAACGCGCG ATGACCGACG CCGACGGCCT GGTTGAGCTG CCTGAGTAA
|
Protein sequence | MAMDLTSILL GLAGAAVPLL ALAWQLQRRA SQNQSEVALL EERLAMAQLA QDGLTAQLEA CRDEIADLGQ ANASKQADLA AVRREVELLQ IERDDARDAA HAWNLERANK EAELRRLDAQ AASLNAELRE QQESHQQRLD DLQGSRDELR AQFAELAGKI FDEREQRFAE TSQQRLGQLL DPLKERIQSF EKRVEESYQA EARERFSLAK ELERLQQLNL RLSDEATNLT RALKGQKTQG NWGELILERV LEHAGLEKGR EYQTQVNLKG PDGERFQPDV IIYLPGDKQV VVDSKVSLTA YQQYVAADDD AIGQIAMKQH VLSLRSHVKG LAGKDYKRLE GLHSLDFVLL FVPIEAAFSA ALQAEPALFQ EAFDRNIVIV SPTTLLATLR VIDSLWKQER QSQNAREIAE RAGWLYDKFV LFIQDLDEVG NRLQQLDKAY SAARNKLTEG RGNLVSRSEQ LKLLGARASK SLPADLLERA MTDADGLVEL PE
|
| |