Gene Pfl01_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1638 
Symbol 
ID3716811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1829396 
End bp1829932 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content64% 
IMG OID 
ProductNLP/P60 
Protein accessionYP_347370 
Protein GI77457865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.52996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0475001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGT CGGCCCGCTT TGCCCTGATG TTCTTCGCAG CGCTGCTCAG CGCCTGCGCC 
AGCCGCACTC CGCCGCCTGC GCCGGTGGTT CGCGCTCCGA TCGTGTTCGG ATCCTCCCAG
GCCTTTTCAC CCGCTGCCGA AGACGTGCTG TTTCGCGCGC TCGGGCTGGT GGGTACGCCC
TATCGTTGGG GTGGCAATAC GCCGGATTCG GGCTTCGATT GCAGTGGCCT GATCGGTTTT
GTCTACCGCG ATGCCGCCGG CATCAGCCTG CCGCGCTCGA CCCGCGAGAT GATCGTCATG
CAGGCGCCGA ATGTCGGCAA GGAAGGGCTG CAGACTGGCG ACCTGATCTT CTTCGCCACC
AATGGCGGCT CACAGGTCAG TCATGCGGGG ATCTATGTCG GGGAAGGGCG CTTCGTTCAT
GCGCCCGCCA CCGGCGGCAC GGTGAAGCTG GACAGCCTGT CGAAAGCGTA TTGGCAGAAA
GCCTATCTGA GCGCCAAGCG CGTTCTGCAG CCAGAGCATC TGGCGCATAA CCCGTAG
 
Protein sequence
MTMSARFALM FFAALLSACA SRTPPPAPVV RAPIVFGSSQ AFSPAAEDVL FRALGLVGTP 
YRWGGNTPDS GFDCSGLIGF VYRDAAGISL PRSTREMIVM QAPNVGKEGL QTGDLIFFAT
NGGSQVSHAG IYVGEGRFVH APATGGTVKL DSLSKAYWQK AYLSAKRVLQ PEHLAHNP