Gene Pfl01_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1630 
Symbol 
ID3716803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1820767 
End bp1822392 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content62% 
IMG OID 
Productchemotaxis sensory transducer 
Protein accessionYP_347362 
Protein GI77457857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0250136 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCC GTAGTCTCAA TATTGCACCC CGGGCCGGGC TGGGTTTTGG CGTGCTGGCG 
CTGATGGTGT TTGCCCTTGG GGCGTTCGCA CTGTTGCAGA TGTCAAACAT GCGCGCGCAG
TCCGACGAGG TCGACAACAA CTGGTTGCCC AGCGTGATGG CGGTGGGCGA GATGAGCCAG
GACATGCTGC GCCTGCGCGC GTTGACCATG CGCCTGTTGC TCAATCGCGA TCCGCAGGCG
CTGGATCAGA ACGTGGCCAA GCTCAATGAT TTGCGCGGTG TGCTGAGTGA AGCCCAGCAA
CGTTACGACA GCCTGATCGC ATTGCCCGAA GAGCGCGCGC TGTTCGACCG CTTCAAGGTC
GCCGAACACA AGTATCTGGA GTTTCAAGCG CAGGTGATGA CCTTGTCTGC TCAGGGACGA
GTGGAAGAGG CGGCCGCCAT TCTCAATGGG CAGATGAGCC CGCTGGCGGA TGAAATTGCG
GTGACCCTGC GTGAACTGGT CGAGCTGAAC AAGCACAACG CCAACCTCGC CACTGAGGCC
GCACGTTTGG TGTTCACTAA CTCGCGGGTG TGGGTCGGGG TGATGATCGG CATCACCGCG
CTGATTACCG TCGCCCTGGC GTTGTTGCTG ACCCGCAGCA TCGTGCTGCC GCTGTCGCAA
TCACTCAGTG TTGCGGAAGT GGTGGCCGGT GGCGACCTGA CCGGGGATAT CAGCATTTCC
GGCAAGGACG AACCGGCGCG ACTGCTGCAC GCGCTCAAGA GCATGCAGCA CAACCTGCGC
GACACTATCC GCCAGATCTC GGAGTCTTCC AGTCAACTGG CCTCGGCTTC GGAAGAATTG
AGCTGTGTTA CCGAAGACGC CACGCGGGGG CTGCACCAGC AGAGTCTGGA AATTGAACAG
GCGGCCACGG CGGTCAATCA GATGACCGCT GCCGTGGAAG AGGTGGCGAG CAATGCCGTC
GCGACTTCCG TGGCCTCCCG TGAGTCAGAT CGAATCGCCC AGCATGGCCG TGAGCAGGTC
CAGCAGACCG TGTCGTCCAT CGAGCTGCTG GCGGACGATG TCACCGCCAA TGCCGCGCAG
GTGGAAGATC TGGCGCAGAA GGTCTACAGC ATCAGCAAAG TACTGGATGT GATTCGCTCG
ATTGCCGAGC AGACCAATCT GCTGGCGTTG AACGCGGCGA TCGAGGCTGC GCGGGCGGGG
GATGCCGGGC GGGGTTTTGC GGTGGTGGCG GACGAAGTGC GGGCGCTGGC CCATCGCACT
CAGCAGTCGA CGCAGGAGAT CGAGCAGATG ATCGGCGGCA TCCAGCAGGG CACCGATTCG
GCGGTCAGCT CGATGCAGCA GAGCAACGTC CGGGCGCGCT CGACTCTGGA GTTGGCGAAG
GCCGCCGGCG TTGCGCTTGA GGAAATCGCT TCGGCATTCA CCTTGATCAA CGAGCGCAAT
CTGGTGATCG CCAGTGCGTC GGAAGAGCAG GCGGCCGTGG CGCGGGAAGT TGATCGCAAC
CTGATGAACA TCCGTGACCT GGCGATGCAG ACGTCTGCAG GGGCCAATCA GACCAGCGCC
GCGAGTCAGG AGTTGTCGCG GCTGGCGGTG GGCCTGAACA GCATGGTCGC CAGGTTCTCG
GTCTGA
 
Protein sequence
MSIRSLNIAP RAGLGFGVLA LMVFALGAFA LLQMSNMRAQ SDEVDNNWLP SVMAVGEMSQ 
DMLRLRALTM RLLLNRDPQA LDQNVAKLND LRGVLSEAQQ RYDSLIALPE ERALFDRFKV
AEHKYLEFQA QVMTLSAQGR VEEAAAILNG QMSPLADEIA VTLRELVELN KHNANLATEA
ARLVFTNSRV WVGVMIGITA LITVALALLL TRSIVLPLSQ SLSVAEVVAG GDLTGDISIS
GKDEPARLLH ALKSMQHNLR DTIRQISESS SQLASASEEL SCVTEDATRG LHQQSLEIEQ
AATAVNQMTA AVEEVASNAV ATSVASRESD RIAQHGREQV QQTVSSIELL ADDVTANAAQ
VEDLAQKVYS ISKVLDVIRS IAEQTNLLAL NAAIEAARAG DAGRGFAVVA DEVRALAHRT
QQSTQEIEQM IGGIQQGTDS AVSSMQQSNV RARSTLELAK AAGVALEEIA SAFTLINERN
LVIASASEEQ AAVAREVDRN LMNIRDLAMQ TSAGANQTSA ASQELSRLAV GLNSMVARFS
V