| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1627 |
|---|
| Symbol | |
|---|
| ID | 3716839 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1818083 |
|---|
| End bp | 1818973 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | Pirin-like |
|---|
| Protein accession | YP_347359 |
|---|
| Protein GI | 77457854 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0199876 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCC AACCCCTGAT CATCCGCCCG CGCGCCGAAG ACGTCGAAGG CCAGCCGATT
CTGCGCCCGC TGCCGTCAGC CAAATGCCGC AGCGTCGGAC CTTTCGTGTT TTTCGACCAC
ATGCTCGAAA CGGTTTATCC GGCGGGCAAA GGCATGAACA TCCGACAGCA TCCGCACATC
GGTCTGTCGA CCCTTACGTA TTTGTTCGAC GGGCAGATCC AGCACAAGGA CAGCCTGGGT
TCGGATCAGG TGGTCAGCGC CGGCGATGTC AGCTGGATGA CTGCCGGCAC GGCGATCGCT
CACGTCGAGC GCACGCCCGA ACCGCTGTGG GAACAATGCT TCAAGATGCA CGGCCTGCAA
ATCTGGCTCG CCTCGCCCAG GGATCACGAA CAAGGCCCGG GGCATTACAG CCACCACCCG
GCCTCGACCT TGCCGGTCAG CGATAACCTC GGTGTACAGA TCCGCATGAT CGCCGGGTCA
GGCTTTTGCC TGGAATCGCC GGTGCCGGTG CTTTCTCCTA CGCTGTATGC CGAATTGAAG
ATGCAAACCG CGACCACACT GCTGATCCCG ACCGAGCATG AAGAGCGGGC GCTGTACGTG
TTGAGTGGTG ATGTGCAATT GAATGGCGAA GCGGTCGAAC CCCATGCGCT GGTAGTGTTG
CCGGCCGGGG AAGAGATGAG CCTGTTCGCC GAAAGCGACA GCCACGCGGT GTTGTTCGGT
GGTGCGCCAC TGGACGGGCC ACGGCGGATC AACTGGAACT TTGTCGCGAG CGATCCGGCG
GCGATCGATG AGGCGCGGCG CAAGTGGGCG GCCGGGGACT GGCCGACGGT GCCGGGGGAA
GTCGAGCGGA TCGAACTGCC TAAATCGCGC AGCGAGCCGA CGCCGCTGTA A
|
|---|
| Protein sequence | MDTQPLIIRP RAEDVEGQPI LRPLPSAKCR SVGPFVFFDH MLETVYPAGK GMNIRQHPHI
GLSTLTYLFD GQIQHKDSLG SDQVVSAGDV SWMTAGTAIA HVERTPEPLW EQCFKMHGLQ
IWLASPRDHE QGPGHYSHHP ASTLPVSDNL GVQIRMIAGS GFCLESPVPV LSPTLYAELK
MQTATTLLIP TEHEERALYV LSGDVQLNGE AVEPHALVVL PAGEEMSLFA ESDSHAVLFG
GAPLDGPRRI NWNFVASDPA AIDEARRKWA AGDWPTVPGE VERIELPKSR SEPTPL
|
|---|
| |