Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1606 |
Symbol | |
ID | 3716916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1793822 |
End bp | 1794673 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_347338 |
Protein GI | 77457833 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.823452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.632336 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGC GACGACTTTT AGGCGCAGGT GCCGCTCTGG TACTTGCGAT GAGCTCCACT TTCGCCAGCG CTGAAAAACA GACCCTGAAC ATCGGTTACG TTGACGGCTG GTCCGACAGC GTCGCGACCA CTCACGTGGC AGCCGAAGTG ATCAAGCAGA AACTCGGCTA CGACGTGAAA CTGCAGGCCG TCGCCACCGG CATCATGTGG CAGGGCGTTG CCACCGGCAA ACTCGACGCC ATGCTCTCGG CCTGGCTGCC AGTGACCCAC GGCGAATACT GGACCAAGAA CAAGGATCAG GTCGTCGATT ACGGCCCGAA CTTCAAGGAC GCGAAAATCG GTCTGATCGT GCCGGAGTAC GTCAAGGCCA AGACCATCGA AGACCTGAAA ACCGACGACT CCTTCAAGAA TCGCATCGTC GGCATCGATG CCGGTTCGGG CGTGATGCTC AAGACCGATC AGGCGATCAA GGATTACGGC CTCGACAAAT ACACCCTCAA GGCCAGTTCC GGCGCCGGCA TGATTGCCGA GCTGACTCGC GCCGAGAAGA AAAACGAATC CATCGCCGTC ACCGGCTGGG TGCCGCACTG GATGTTCGCC AAGTGGAAAC TGCGCTTCCT CGACGACCCG AAAGGCGTGT ATGGCGCGGC TGAAACCGTG AACAGCATCG GCAGCAAGGA ACTGGCGACC AAGGCGCCGG AAGTGGCCAA GTTCCTGAAG AACTTCCAGT GGGCTTCGAA AGACGAAATC GGCGAAGTCA TGCTGGCAAT TCAGGACGGT GCAAAACCTG ACGCAGCGGC CAAGGATTGG GTTGCCAAGC ACCCTGAGCG TGTTGCCGAC TGGACCAAGT GA
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Protein sequence | MKMRRLLGAG AALVLAMSST FASAEKQTLN IGYVDGWSDS VATTHVAAEV IKQKLGYDVK LQAVATGIMW QGVATGKLDA MLSAWLPVTH GEYWTKNKDQ VVDYGPNFKD AKIGLIVPEY VKAKTIEDLK TDDSFKNRIV GIDAGSGVML KTDQAIKDYG LDKYTLKASS GAGMIAELTR AEKKNESIAV TGWVPHWMFA KWKLRFLDDP KGVYGAAETV NSIGSKELAT KAPEVAKFLK NFQWASKDEI GEVMLAIQDG AKPDAAAKDW VAKHPERVAD WTK
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