Gene Pfl01_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1606 
Symbol 
ID3716916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1793822 
End bp1794673 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content59% 
IMG OID 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_347338 
Protein GI77457833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.823452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.632336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGC GACGACTTTT AGGCGCAGGT GCCGCTCTGG TACTTGCGAT GAGCTCCACT 
TTCGCCAGCG CTGAAAAACA GACCCTGAAC ATCGGTTACG TTGACGGCTG GTCCGACAGC
GTCGCGACCA CTCACGTGGC AGCCGAAGTG ATCAAGCAGA AACTCGGCTA CGACGTGAAA
CTGCAGGCCG TCGCCACCGG CATCATGTGG CAGGGCGTTG CCACCGGCAA ACTCGACGCC
ATGCTCTCGG CCTGGCTGCC AGTGACCCAC GGCGAATACT GGACCAAGAA CAAGGATCAG
GTCGTCGATT ACGGCCCGAA CTTCAAGGAC GCGAAAATCG GTCTGATCGT GCCGGAGTAC
GTCAAGGCCA AGACCATCGA AGACCTGAAA ACCGACGACT CCTTCAAGAA TCGCATCGTC
GGCATCGATG CCGGTTCGGG CGTGATGCTC AAGACCGATC AGGCGATCAA GGATTACGGC
CTCGACAAAT ACACCCTCAA GGCCAGTTCC GGCGCCGGCA TGATTGCCGA GCTGACTCGC
GCCGAGAAGA AAAACGAATC CATCGCCGTC ACCGGCTGGG TGCCGCACTG GATGTTCGCC
AAGTGGAAAC TGCGCTTCCT CGACGACCCG AAAGGCGTGT ATGGCGCGGC TGAAACCGTG
AACAGCATCG GCAGCAAGGA ACTGGCGACC AAGGCGCCGG AAGTGGCCAA GTTCCTGAAG
AACTTCCAGT GGGCTTCGAA AGACGAAATC GGCGAAGTCA TGCTGGCAAT TCAGGACGGT
GCAAAACCTG ACGCAGCGGC CAAGGATTGG GTTGCCAAGC ACCCTGAGCG TGTTGCCGAC
TGGACCAAGT GA
 
Protein sequence
MKMRRLLGAG AALVLAMSST FASAEKQTLN IGYVDGWSDS VATTHVAAEV IKQKLGYDVK 
LQAVATGIMW QGVATGKLDA MLSAWLPVTH GEYWTKNKDQ VVDYGPNFKD AKIGLIVPEY
VKAKTIEDLK TDDSFKNRIV GIDAGSGVML KTDQAIKDYG LDKYTLKASS GAGMIAELTR
AEKKNESIAV TGWVPHWMFA KWKLRFLDDP KGVYGAAETV NSIGSKELAT KAPEVAKFLK
NFQWASKDEI GEVMLAIQDG AKPDAAAKDW VAKHPERVAD WTK