Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1596 |
Symbol | |
ID | 3716906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1783136 |
End bp | 1784029 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | 2-hydroxy-3-oxopropionate reductase |
Protein accession | YP_347328 |
Protein GI | 77457823 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00205037 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.688785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAAA TCGGATTTAT CGGCACCGGC ATCATGGGCC ACCCAATGGC GGCGAACCTG CAGAAAGCCG GTCACAGCCT GTTCCTGTCG GCGCACCACG ATGCTGCCCC TGCCGACCTG GTCGCCGCTG GCGCCGTCGC TCTGGCCAAC CCGCGCGAAG TGGCTCAGGA AGCTGAATTC ATCATCGTCA TGGTGCCGGA TACCCCGCAG GTCGAAGACG TGCTGTTCCG CGCCGACGGC GTCGCGGCCG GCATCGGCAA AGGCAAGGTG GTGATCGACA TGAGCTCGAT CTCGCCGACC GCCACCAAGG CTTTTGCCGC GAAGATCAAC GAGAAAGGTG CGCAATACCT CGACGCCCCG GTGTCCGGCG GTGAAGTCGG CGCCAAGGCC GCGACCCTGA GCATCATGGT CGGTGGCGAC GCCGATGCCT TCGAACGCGC ACTGCCGCTG TTCCAGGCCA TGGGCAAGAA CATCACCCTG GTCGGTGGCA ATGGCGACGG TCAGACCGCC AAGGTGGCGA ACCAGATCAT CGTTGCCCTG AACATTCAGG CCGTCGCCGA AGCCCTGCTG TTCGCCTCGA AAAACGGTGC CGATCCAGCC AAGGTGCGTG AGGCATTGAT GGGCGGTTTC GCCTCCTCGA AGATTCTCGA AGTGCACGGC GAGCGCATGA TCAAGGGCAC CTTCGATCCG GGCTTCCGCA TCAGCCTGCA CCAGAAGGAC CTGAACCTGG CCCTGCAAGG CGCCAAGGAG CTGAACATCA ACCTGCCGAA CACCGCCAAC GCCCAGCAAG TGTTCAGCAC CTGCGCGGCC ATCGGTGGCA GCAACTGGGA CCACTCGGCG CTGATCAAGG GCCTGGAACA CATGGCCAAC TTCACGATTC GCGACAAGAA GTAA
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Protein sequence | MAKIGFIGTG IMGHPMAANL QKAGHSLFLS AHHDAAPADL VAAGAVALAN PREVAQEAEF IIVMVPDTPQ VEDVLFRADG VAAGIGKGKV VIDMSSISPT ATKAFAAKIN EKGAQYLDAP VSGGEVGAKA ATLSIMVGGD ADAFERALPL FQAMGKNITL VGGNGDGQTA KVANQIIVAL NIQAVAEALL FASKNGADPA KVREALMGGF ASSKILEVHG ERMIKGTFDP GFRISLHQKD LNLALQGAKE LNINLPNTAN AQQVFSTCAA IGGSNWDHSA LIKGLEHMAN FTIRDKK
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