Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1582 |
Symbol | |
ID | 3716950 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1769646 |
End bp | 1771634 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | cytochrome c-type biogenesis protein CcmF |
Protein accession | YP_347314 |
Protein GI | 77457809 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.861577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCCA GCATTTTCAT TCCTGAGTTG GGCCATCTGG CCATGATCCT GGCGCTGTGT TTCGCGCTGG TGCAGGCGGT GGTGCCGTTG CTCGGTGCCT GGCGCGGTGA TCGTCTGTGG ATGGGCCTCG CTCAACCGGC GGCGTGGGGG CAGTTCGCGT TCCTGCTGTT CGCCTTCGGT TGCCTGACCT ACGCCTTCAT GACCGACGAT TTCTCCGTGG CCTACGTCGC GATGAACTCC AACAGCGCGC TGCCGTGGTA CTACAAGTTC AGCGCGGTGT GGGGCGCCCA CGAAGGGTCG CTGCTGCTGT GGGCGCTGAT CCTCGGCGGC TGGACCTTCG CGGTGTCGGT GTTCTCGCGG CAGTTGCCGC AAGTCATGCT CGCTCGCGTG CTGGCGGTGA TGGGCATGAT CAGCACCGGT TTTCTGCTGT TCCTGATCCT CACCTCGAAC CCGTTTTCGC GGATCCTGCC GCAGATCCCG GCCGACGGTC GTGACCTCAA TCCGCTGCTG CAGGACATCG GCCTGATCGT TCATCCGCCG ATGCTGTACA TGGGCTATGT CGGTTTCTCG GTGGCCTTCG CGTTTGCCAT TGCCGCATTG CTGGGCGGTC GTCTCGATGC GGCGTGGGCA CGCTGGTCGC GTCCGTGGAC CATCGTCGCC TGGGCCTTCC TCGGCATCGG CATCACCCTC GGTTCATGGT GGGCTTACTA CGAACTCGGC TGGGGCGGCT GGTGGTTCTG GGACCCGGTG GAAAACGCAT CGTTCATGCC ATGGCTGGTG GGCACGGCGC TGATTCACTC GCTGGCGGTC ACCGAGAAAC GTGGCGTGTT CAAGAGCTGG ACGGTGTTGC TGGCGATTGC CGCATTCTCC CTGAGCCTGC TCGGTACGTT CCTCGTACGT TCCGGCGTGC TGACCTCGGT GCACGCGTTT GCCTCCGATC CTGAGCGCGG CGTGTTCATC CTGATCTTCC TGCTGTTCGT GGTCGGTGGT TCGCTGACAC TGTTTGCGCT GCGCGCGCCG GTGGTCAAGA GCCAGGTCGG TTTCAATCTG TGGTCGCGGG AAACCCTGCT GCTGGGTAAC AACCTGGTGC TGGTGGTGGC GGCGTCGATG ATCCTGCTCG GCACGCTGTA CCCGCTGATT CTCGATGCGA TCAGCGGCGC CAAGCTGTCG GTCGGCCCGC CGTACTTCAA CGCGCTGTTC ATTCCGTTGA TGGCGCTGTT GATGCTGGTG ATGGCGGTCG GCGTGATCGT GCGCTGGAAG GACACCCCGG TGAAATGGCT GGTCAGTATG CTGACTCCGG TGCTGCTGGG CAGCGTCGCG CTGGCGGTGG TGGCCGGTGT CGCTTATGGT GATTTCAACT GGGCGGTGAT CGCGACGTTC CTGCTTGCGG CCTGGGTGTT GCTGGCCGGT GTGCGCGACA TCTTCGACAA GACTCGTCAC AAAGGCCTGA TCAAAGGCCT GCCGACCCTG ACCCGCAGCT ACTGGGGCAT GCAGATCGCC CACCTCGGGA TCGCCGTCTG CGCGCTGGGC GTGGTGTTGT CGAGCCAGAA CAGTGCCGAA CGTGACCTGC GTCTGGCACC GGGCGAATCA ATGGACCTGG CCGGTTATCA GTTCGTGTTT GAAGGCGCCA AGCACTTCGA AGGCCCGAAC TTCACTTCCG ACAAGGGCAC CGTCCGGGTG ATCCGCAACG GTCAGGAAGT CAGCGTGCTG CACCCGGAAA AACGCCTGTA CACCGTGCAG AACTCGGTGA TGACCGAAGC CGGGATCGAC GCCGGTTTCA CCCGTGACCT CTACGTCGCT TTGGGTGAAC CGCTGGGCGA TGGCGCCTGG GCAGTGCGGG TCCACGTCAA ACCGTTCGTG CGCTGGATCT GGTTCGGCGG CCTGCTGACC GGTTTCGGTG GTTTGCTGGC GGCGCTGGAT CGGCGTTATC GAGTGAAGGT CAAAGCCAAA GTGCGTGAAG CGCTGGGCAT GGAAGGAGCC GCTGCATGA
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Protein sequence | MTSSIFIPEL GHLAMILALC FALVQAVVPL LGAWRGDRLW MGLAQPAAWG QFAFLLFAFG CLTYAFMTDD FSVAYVAMNS NSALPWYYKF SAVWGAHEGS LLLWALILGG WTFAVSVFSR QLPQVMLARV LAVMGMISTG FLLFLILTSN PFSRILPQIP ADGRDLNPLL QDIGLIVHPP MLYMGYVGFS VAFAFAIAAL LGGRLDAAWA RWSRPWTIVA WAFLGIGITL GSWWAYYELG WGGWWFWDPV ENASFMPWLV GTALIHSLAV TEKRGVFKSW TVLLAIAAFS LSLLGTFLVR SGVLTSVHAF ASDPERGVFI LIFLLFVVGG SLTLFALRAP VVKSQVGFNL WSRETLLLGN NLVLVVAASM ILLGTLYPLI LDAISGAKLS VGPPYFNALF IPLMALLMLV MAVGVIVRWK DTPVKWLVSM LTPVLLGSVA LAVVAGVAYG DFNWAVIATF LLAAWVLLAG VRDIFDKTRH KGLIKGLPTL TRSYWGMQIA HLGIAVCALG VVLSSQNSAE RDLRLAPGES MDLAGYQFVF EGAKHFEGPN FTSDKGTVRV IRNGQEVSVL HPEKRLYTVQ NSVMTEAGID AGFTRDLYVA LGEPLGDGAW AVRVHVKPFV RWIWFGGLLT GFGGLLAALD RRYRVKVKAK VREALGMEGA AA
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