Gene Pfl01_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1578 
Symbol 
ID3716946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1767515 
End bp1768183 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content61% 
IMG OID 
Productcytochrome c-type biogenesis protein CcmB 
Protein accessionYP_347310 
Protein GI77457805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.462217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGT TCGGCCTGCT GGTTGCCCGT GAATCCCGAC TGCTGTTCCG CCGCCCGGCG 
GAGCTGGCCA ATCCGCTGAT TTTCTTCGCC ATCGTCATCG CGCTGTTCCC GCTGGCCGTC
GGACCGGAAA CTCAAGTATT GCAAAACTTG TCTCCGGGGT TAGTCTGGGT GGCGGCACTT
TTGTCGGTCC TGCTCTCGCT GGACGGGCTT TTCCGCAGTG ATTTCGAAGA TGGCTCCCTT
GAACAGTGGG TCCTTTCGCC GCACCCCCTG CCACTTCTGG TATTGGCCAA GGTGCTGGCA
CACTGGCTTT TTTCCGGGCT GGCACTGGTT TTGCTCTCGC CGTTACTGGC GTTGATGCTC
GGGTTGCCGG CTGCGTGTCT GCCGGTATTG CTGCTTTCGT TGTTGCTGGG AACACCGGTG
CTGAGCTTGC TCGGTGCGGT GGGCGCGGCG CTGACGGTCG GTCTGAAGCG CGGTGGCCTG
TTGCTGGCGC TGCTGATTCT GCCGTTGTAC ATCCCGGTGT TGATCCTGGG CAGTGGCGCC
TTGCAGGCGG CGTTGCAGGG CATGCCGGCG CTTGGTTATC TGTTGTGGCT TGGCAGCCTG
ACCGCCCTGG CGATAACCCT GACACCTTTT GCAATAGCGG CTGGCCTGAA GATCAGCGTC
GGCGAATAA
 
Protein sequence
MSVFGLLVAR ESRLLFRRPA ELANPLIFFA IVIALFPLAV GPETQVLQNL SPGLVWVAAL 
LSVLLSLDGL FRSDFEDGSL EQWVLSPHPL PLLVLAKVLA HWLFSGLALV LLSPLLALML
GLPAACLPVL LLSLLLGTPV LSLLGAVGAA LTVGLKRGGL LLALLILPLY IPVLILGSGA
LQAALQGMPA LGYLLWLGSL TALAITLTPF AIAAGLKISV GE