Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1578 |
Symbol | |
ID | 3716946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1767515 |
End bp | 1768183 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | cytochrome c-type biogenesis protein CcmB |
Protein accession | YP_347310 |
Protein GI | 77457805 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.462217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGT TCGGCCTGCT GGTTGCCCGT GAATCCCGAC TGCTGTTCCG CCGCCCGGCG GAGCTGGCCA ATCCGCTGAT TTTCTTCGCC ATCGTCATCG CGCTGTTCCC GCTGGCCGTC GGACCGGAAA CTCAAGTATT GCAAAACTTG TCTCCGGGGT TAGTCTGGGT GGCGGCACTT TTGTCGGTCC TGCTCTCGCT GGACGGGCTT TTCCGCAGTG ATTTCGAAGA TGGCTCCCTT GAACAGTGGG TCCTTTCGCC GCACCCCCTG CCACTTCTGG TATTGGCCAA GGTGCTGGCA CACTGGCTTT TTTCCGGGCT GGCACTGGTT TTGCTCTCGC CGTTACTGGC GTTGATGCTC GGGTTGCCGG CTGCGTGTCT GCCGGTATTG CTGCTTTCGT TGTTGCTGGG AACACCGGTG CTGAGCTTGC TCGGTGCGGT GGGCGCGGCG CTGACGGTCG GTCTGAAGCG CGGTGGCCTG TTGCTGGCGC TGCTGATTCT GCCGTTGTAC ATCCCGGTGT TGATCCTGGG CAGTGGCGCC TTGCAGGCGG CGTTGCAGGG CATGCCGGCG CTTGGTTATC TGTTGTGGCT TGGCAGCCTG ACCGCCCTGG CGATAACCCT GACACCTTTT GCAATAGCGG CTGGCCTGAA GATCAGCGTC GGCGAATAA
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Protein sequence | MSVFGLLVAR ESRLLFRRPA ELANPLIFFA IVIALFPLAV GPETQVLQNL SPGLVWVAAL LSVLLSLDGL FRSDFEDGSL EQWVLSPHPL PLLVLAKVLA HWLFSGLALV LLSPLLALML GLPAACLPVL LLSLLLGTPV LSLLGAVGAA LTVGLKRGGL LLALLILPLY IPVLILGSGA LQAALQGMPA LGYLLWLGSL TALAITLTPF AIAAGLKISV GE
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