| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1546 |
|---|
| Symbol | fliM |
|---|
| ID | 3717010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1734569 |
|---|
| End bp | 1735537 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | flagellar motor switch protein FliM |
|---|
| Protein accession | YP_347278 |
|---|
| Protein GI | 77457773 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0457141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.871415 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTGC AGGATCTGCT GTCCCAGGAT GAAATCGACG CGCTGTTGCA TGGCGTCGAC
GATGGTCTGG TACAGACCGA TAACGCTGCC GAACCCGGCA GTGTCAAAAG CTACGACCTG
ACCAGCCAGG ATCGCATCGT CCGTGGACGC ATGCCGACTC TGGAAATGAT CAACGAGCGT
TTTGCCCGCT ACACCCGCAT CAGCATGTTC AACATGCTGC GCCGCTCGGC GGACGTTGCC
GTCGGTGGCG TACAGGTGAT GAAGTTCGGC GAATACGTGC ACTCGCTGTA CGTGCCGACC
AGCCTCAACC TGGTCAAGAT CAAACCCCTG CGCGGCACCG CGCTGTTCAT CCTCGACGCC
AAACTGGTGT TCAAGCTGGT GGACAACTTC TTCGGCGGCG ACGGCCGTCA CGCCAAGATC
GAAGGGCGTG AATTCACCCC GACCGAACTG CGCGTGGTGC GCATGGTGCT GGAGCAGGCG
TTCGTCGATT TGAAAGAAGC CTGGCAGGCG ATCATGGAAG TCAACTTCGA GTACATCAAC
TCGGAAGTGA ACCCGGCCAT GGCCAACATC GTCGGTCCGA GCGAAGCGAT CGTGGTTTCC
ACGTTCCACA TCGAACTCGA CGGCGGTGGC GGTGATCTGC ACGTGACCAT GCCGTACTCG
ATGATCGAGC CGGTGCGCGA AATGCTCGAC GCCGGTTTCC AGTCGGACCT CGACGACCAG
GACGAGCGCT GGGTCAATGC CCTGCGCCAG GACGTGCTGG ATGTCGACGT GCCGATCGGC
GCCACCGTAG CTCGTCGCCA GCTGAAACTG CGCGACATCC TGCACATGCA GCCGGGGGAC
GTGATCCCGG TCGAGATGCC GGAAGACATG ATCATGCGCG CCAACGGCGT GCCGGCCTTC
AAGGTCAAGA TGGGCTCGCA CAAAGGCAAC CTTGCGTTGC AGGTGATCGA GCCGATCGAG
CGCCGCTGA
|
|---|
| Protein sequence | MAVQDLLSQD EIDALLHGVD DGLVQTDNAA EPGSVKSYDL TSQDRIVRGR MPTLEMINER
FARYTRISMF NMLRRSADVA VGGVQVMKFG EYVHSLYVPT SLNLVKIKPL RGTALFILDA
KLVFKLVDNF FGGDGRHAKI EGREFTPTEL RVVRMVLEQA FVDLKEAWQA IMEVNFEYIN
SEVNPAMANI VGPSEAIVVS TFHIELDGGG GDLHVTMPYS MIEPVREMLD AGFQSDLDDQ
DERWVNALRQ DVLDVDVPIG ATVARRQLKL RDILHMQPGD VIPVEMPEDM IMRANGVPAF
KVKMGSHKGN LALQVIEPIE RR
|
|---|
| |