Gene Pfl01_1515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1515 
Symbol 
ID3717018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1702381 
End bp1703040 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content63% 
IMG OID 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_347247 
Protein GI77457742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGC TGGGGGCCGC CAACCCGGAA GCGGTGCGCA TGCTGCACGC GGTCAAGCGC 
AGTACGCCGA ATGTCGAGTT CGCCTTTCTG GACAACGATC CGCGCAAGCA CGGCACGCTG
TTTTACGGGG TGCCGGTGGT GGGTGGTTCG GAGCGGGTCG CCGAGCTCAA TGGCCCGGAC
GTGCGCTTCG TCAATCTGAT CACCGGCAGT ACCCGGTTAC GCTACGAAAC CACCTGTCAG
TTGGTGGAGG CAGGGGCGAA GCTCGGCCAG TTCGTTCATC CCGGTATCGA CCTGAGCATG
ATCCGCATGG GGCAGGGCAG TTACCTGCAG GAAGGCGTGT TGATGCAGGC CGAAGTCGAA
CTCGGCGACA ACACCAGCAT CAGCGCCGGT AGCGTCGTGG GGCATGAAGG GCGGATCGGC
CATTCAGTGT TCATGGCGCC GGGCGTGTGC ATCGCCGGCT GTGTGGAAAT CGGCGACGGT
ACGTTTATCG GTACCAACGC CACGATTCTG CCGCGCCTGC GCATCGGTCG CTGGGTGACC
ATCGGCGCCG GCGCTGTGGT GACAAAGGAC GTCCCGGATT TTTCGGTCGT GGTGGGCAAT
CCCGCCAGGA TCATCAAGAC CAACACCGTG CCATACCCTG ACGCCAGGGT GTTCAGGTAA
 
Protein sequence
MYLLGAANPE AVRMLHAVKR STPNVEFAFL DNDPRKHGTL FYGVPVVGGS ERVAELNGPD 
VRFVNLITGS TRLRYETTCQ LVEAGAKLGQ FVHPGIDLSM IRMGQGSYLQ EGVLMQAEVE
LGDNTSISAG SVVGHEGRIG HSVFMAPGVC IAGCVEIGDG TFIGTNATIL PRLRIGRWVT
IGAGAVVTKD VPDFSVVVGN PARIIKTNTV PYPDARVFR