Gene Pfl01_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1512 
Symbol 
ID3717015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1699477 
End bp1700037 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_347244 
Protein GI77457739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGT TTTCCTTGAA ACCGTTGCCG CTGGCCGGGT TGTTCAGCGT CCAGCACAAG 
CGCTTCGAAG ATCAGCGCGG GCACTTCGCC CGTCTGTTCT GCGAAGGCAG CCTGAAAGCG
TTCGGCAGTG AATTTCACAT CCGCCAGATC AACCATTCCT GCACCCGCGA GAAGGGCAGC
GTGCGCGGTC TGCATTACCA GAACGCCAAT GCGCCGGAAG CCAAGTTGAT CACCTGCCTG
CGAGGTGAAG TGTGGGACGT AGCGGTAGAC CTGCGCCCGG ACTCGGAAAC CTTCCTGCAC
TGGCACGCCG AGCACCTGAA GGCCGGTGAC GGTCGCAGCC TGTTGATTCC GGCCGGCTTC
GCCCACGGTT TCCAGACCCT CACTGAAGAC GCCGAACTGC TTTACCTGCA CAGCGCCGAT
TACGCGCCGG AGCACGAGGG CGGTCTGTCG GTGAACGATC CACGGCTGGC GATCGCCTGG
CCGTTGCCTG TCAATAATTT GTCAGCGCGT GATTCCAGCC ATCCCGCGCT CGATCAACAC
TTTGCTGGAG TGCGTCTATG A
 
Protein sequence
MSEFSLKPLP LAGLFSVQHK RFEDQRGHFA RLFCEGSLKA FGSEFHIRQI NHSCTREKGS 
VRGLHYQNAN APEAKLITCL RGEVWDVAVD LRPDSETFLH WHAEHLKAGD GRSLLIPAGF
AHGFQTLTED AELLYLHSAD YAPEHEGGLS VNDPRLAIAW PLPVNNLSAR DSSHPALDQH
FAGVRL