Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1512 |
Symbol | |
ID | 3717015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1699477 |
End bp | 1700037 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_347244 |
Protein GI | 77457739 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGT TTTCCTTGAA ACCGTTGCCG CTGGCCGGGT TGTTCAGCGT CCAGCACAAG CGCTTCGAAG ATCAGCGCGG GCACTTCGCC CGTCTGTTCT GCGAAGGCAG CCTGAAAGCG TTCGGCAGTG AATTTCACAT CCGCCAGATC AACCATTCCT GCACCCGCGA GAAGGGCAGC GTGCGCGGTC TGCATTACCA GAACGCCAAT GCGCCGGAAG CCAAGTTGAT CACCTGCCTG CGAGGTGAAG TGTGGGACGT AGCGGTAGAC CTGCGCCCGG ACTCGGAAAC CTTCCTGCAC TGGCACGCCG AGCACCTGAA GGCCGGTGAC GGTCGCAGCC TGTTGATTCC GGCCGGCTTC GCCCACGGTT TCCAGACCCT CACTGAAGAC GCCGAACTGC TTTACCTGCA CAGCGCCGAT TACGCGCCGG AGCACGAGGG CGGTCTGTCG GTGAACGATC CACGGCTGGC GATCGCCTGG CCGTTGCCTG TCAATAATTT GTCAGCGCGT GATTCCAGCC ATCCCGCGCT CGATCAACAC TTTGCTGGAG TGCGTCTATG A
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Protein sequence | MSEFSLKPLP LAGLFSVQHK RFEDQRGHFA RLFCEGSLKA FGSEFHIRQI NHSCTREKGS VRGLHYQNAN APEAKLITCL RGEVWDVAVD LRPDSETFLH WHAEHLKAGD GRSLLIPAGF AHGFQTLTED AELLYLHSAD YAPEHEGGLS VNDPRLAIAW PLPVNNLSAR DSSHPALDQH FAGVRL
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