Gene Pfl01_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1506 
SymbolflgK 
ID3717106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1684928 
End bp1686973 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content61% 
IMG OID 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_347238 
Protein GI77457733 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTGC TCAATATCGG GATGTCGGGG TTGGCCGCGA GTTCATCCTC TCTGGCTGTG 
ACGGGCAACA ACATTGCCAA CGTCGACACC GCCGGTTATT CACGCCAGCA AACCGTGCAG
GGCACCAAGT CCTCGATTCA GTACGGTAAC GTGTTCATCG GTACCGGTAC GACTCTGGCC
GACGTGCGCC GGGTGTACAA CTCCTACCTC GAATCGCAGC TGCGTACCGC CACGTCGCTC
AATAGCGAAG CCGCCGCCTT CGGTGCGCAG GCGACCGCGC TGGACGGCTC GCTGTCCGAC
ACCAACACTG GCCTGACCGG TGTGCTGCAG AAATTCTTCA CCTCGATGCA AGGCGTGTCG
ACCTCGGCCA CCGACGACAC TTCCCGCCAG TCGGTGCTGA CCGGCGCCCA GGCCCTGACC
AGTCGCTTCA ATGCGCTGGC CAAGCAGATG AACGATCAGA ACGCCACGCT CAATGGCAAC
CTGTCCGACA TGGCGTCCCA GGTGAACAAA CTGGCAACCT CGATTGCCAC GCTGAACCAG
AAGATCGGCG AGATCTCCAC CAGCGGCGGC CAGCCGAACG ATCTGCTCGA CAGCCGTAAC
GAAGCCGTGC GTCAACTCTC CGAGCTGACC GGCGCGCAAG TCGTTGAGCG TGGCACCAGC
TTCGACATCT ACATCGGCAG CGGCCAGCCG TTGGTCATCG GCAATACCAC CAATACCCTG
AGCACCGTGC CGCTCAAGGG TGACCCATCG CGCATGGGCA TCCAGATGGA TCGTGGTTCG
AGCACCATCG ACATCACCTC GGCGATGACC GGTGGTGAAA TCGGCGGTCT GCTGACTTAT
CGCAAGGAAG TGCTCGATCC TGCACTCAAC GAGCTGGGCC GTGTGGCACT GGTCGTTGCC
GACCAGATCA ACCGCCAGCA AGCCCAGGGC ATCGACAAGA ACGGTGACTT TGGCGCGGCC
ATTTTCAACA ACATCAACAG TGCCGCCCTG ATCAGTCAGC GCAGCATCGC CCAGTCCGGC
AACAGTGCAG GTTCGGGCAA TCTTGATGTC ACCATCAAGG ACACCGGCAA GCTGACCACC
AGCGACTATC AGGTCACCTT CACCAGCGCG ACCAACTACA CGGTCAAGCG CTCCGACGGC
ACCGACATGG GTTCGTTCAG CACCACGACC ACGCCGCCTC CGGTAATCGA CGGCTTTACC
CTGGCCCTTA ACGGTGGTGC GCTGAGCGCC GGCGATACGT TCAAGGTCAC CCCGACCCGC
AACGCGGCGT CCAGCATTCA GACCGTGCTT ACCGACCCGA AGAAAATCGC CGCCGCCGGA
CCATTGACCG GCGTGGCCAG TGCCAACAAC TCAGGCACCT ACACTCAGCC GACGCTGACT
GACGTCGTCG ATATCTACAA CCCGGCGTCC CAGGCAGAGT TGCAGAACGC GCTCAAGTAT
TCGACCCCGG TCAAACTGGT ATTCGGTGCC ACCACCAGCG GCAGCCAGAC TTACAACATG
GTTGATGCCA AGGGGGCCAC GATCGGTTCC GGCGTCATCG TTCCCGGTCA GGCGAACACC
CTGAACCTGA AGATCGGCAT GGTCGACTCC ACCGGTGCTC CGGTGATGGA CACCACCGTC
ATCCCGAACG TGCAAAAGAC CTTCACCGTG CAGACCACTG TGGGCGCGAC GCCGAAGTCC
GGCGAAACCT TCACCATCAA CCTGACCGGC GCGGCCTCTT CGGACAACCG CAACGCCCAG
GCACTGGTCG GTTTGCAGAC CAAACAGACC GTTGACACCG GCACGGCGAG CAAGGGCATC
AGCCTGACCG ACGCTTACAA CAAACTGGTA ACCAACGTCG GTACCCAGGC TGCCCAGAGC
AAATCCGACA GCGCAGCCAC CACGGTGATC CTGGATCAGG CCCAGGGTGC ACGGGACTCG
CTGTCCCAGG TCAACCTGGA TGAAGAGACC GGCAACCTGG TCAAGTATCA GCAGTACTAC
ACAGCGTCTT CGCAGATCAT CAAAGCTGCG CAGGAAACCT TCGCCACGCT GATCAACAGC
CTTTAA
 
Protein sequence
MSLLNIGMSG LAASSSSLAV TGNNIANVDT AGYSRQQTVQ GTKSSIQYGN VFIGTGTTLA 
DVRRVYNSYL ESQLRTATSL NSEAAAFGAQ ATALDGSLSD TNTGLTGVLQ KFFTSMQGVS
TSATDDTSRQ SVLTGAQALT SRFNALAKQM NDQNATLNGN LSDMASQVNK LATSIATLNQ
KIGEISTSGG QPNDLLDSRN EAVRQLSELT GAQVVERGTS FDIYIGSGQP LVIGNTTNTL
STVPLKGDPS RMGIQMDRGS STIDITSAMT GGEIGGLLTY RKEVLDPALN ELGRVALVVA
DQINRQQAQG IDKNGDFGAA IFNNINSAAL ISQRSIAQSG NSAGSGNLDV TIKDTGKLTT
SDYQVTFTSA TNYTVKRSDG TDMGSFSTTT TPPPVIDGFT LALNGGALSA GDTFKVTPTR
NAASSIQTVL TDPKKIAAAG PLTGVASANN SGTYTQPTLT DVVDIYNPAS QAELQNALKY
STPVKLVFGA TTSGSQTYNM VDAKGATIGS GVIVPGQANT LNLKIGMVDS TGAPVMDTTV
IPNVQKTFTV QTTVGATPKS GETFTINLTG AASSDNRNAQ ALVGLQTKQT VDTGTASKGI
SLTDAYNKLV TNVGTQAAQS KSDSAATTVI LDQAQGARDS LSQVNLDEET GNLVKYQQYY
TASSQIIKAA QETFATLINS L