Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1506 |
Symbol | flgK |
ID | 3717106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1684928 |
End bp | 1686973 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | flagellar hook-associated protein FlgK |
Protein accession | YP_347238 |
Protein GI | 77457733 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTTGC TCAATATCGG GATGTCGGGG TTGGCCGCGA GTTCATCCTC TCTGGCTGTG ACGGGCAACA ACATTGCCAA CGTCGACACC GCCGGTTATT CACGCCAGCA AACCGTGCAG GGCACCAAGT CCTCGATTCA GTACGGTAAC GTGTTCATCG GTACCGGTAC GACTCTGGCC GACGTGCGCC GGGTGTACAA CTCCTACCTC GAATCGCAGC TGCGTACCGC CACGTCGCTC AATAGCGAAG CCGCCGCCTT CGGTGCGCAG GCGACCGCGC TGGACGGCTC GCTGTCCGAC ACCAACACTG GCCTGACCGG TGTGCTGCAG AAATTCTTCA CCTCGATGCA AGGCGTGTCG ACCTCGGCCA CCGACGACAC TTCCCGCCAG TCGGTGCTGA CCGGCGCCCA GGCCCTGACC AGTCGCTTCA ATGCGCTGGC CAAGCAGATG AACGATCAGA ACGCCACGCT CAATGGCAAC CTGTCCGACA TGGCGTCCCA GGTGAACAAA CTGGCAACCT CGATTGCCAC GCTGAACCAG AAGATCGGCG AGATCTCCAC CAGCGGCGGC CAGCCGAACG ATCTGCTCGA CAGCCGTAAC GAAGCCGTGC GTCAACTCTC CGAGCTGACC GGCGCGCAAG TCGTTGAGCG TGGCACCAGC TTCGACATCT ACATCGGCAG CGGCCAGCCG TTGGTCATCG GCAATACCAC CAATACCCTG AGCACCGTGC CGCTCAAGGG TGACCCATCG CGCATGGGCA TCCAGATGGA TCGTGGTTCG AGCACCATCG ACATCACCTC GGCGATGACC GGTGGTGAAA TCGGCGGTCT GCTGACTTAT CGCAAGGAAG TGCTCGATCC TGCACTCAAC GAGCTGGGCC GTGTGGCACT GGTCGTTGCC GACCAGATCA ACCGCCAGCA AGCCCAGGGC ATCGACAAGA ACGGTGACTT TGGCGCGGCC ATTTTCAACA ACATCAACAG TGCCGCCCTG ATCAGTCAGC GCAGCATCGC CCAGTCCGGC AACAGTGCAG GTTCGGGCAA TCTTGATGTC ACCATCAAGG ACACCGGCAA GCTGACCACC AGCGACTATC AGGTCACCTT CACCAGCGCG ACCAACTACA CGGTCAAGCG CTCCGACGGC ACCGACATGG GTTCGTTCAG CACCACGACC ACGCCGCCTC CGGTAATCGA CGGCTTTACC CTGGCCCTTA ACGGTGGTGC GCTGAGCGCC GGCGATACGT TCAAGGTCAC CCCGACCCGC AACGCGGCGT CCAGCATTCA GACCGTGCTT ACCGACCCGA AGAAAATCGC CGCCGCCGGA CCATTGACCG GCGTGGCCAG TGCCAACAAC TCAGGCACCT ACACTCAGCC GACGCTGACT GACGTCGTCG ATATCTACAA CCCGGCGTCC CAGGCAGAGT TGCAGAACGC GCTCAAGTAT TCGACCCCGG TCAAACTGGT ATTCGGTGCC ACCACCAGCG GCAGCCAGAC TTACAACATG GTTGATGCCA AGGGGGCCAC GATCGGTTCC GGCGTCATCG TTCCCGGTCA GGCGAACACC CTGAACCTGA AGATCGGCAT GGTCGACTCC ACCGGTGCTC CGGTGATGGA CACCACCGTC ATCCCGAACG TGCAAAAGAC CTTCACCGTG CAGACCACTG TGGGCGCGAC GCCGAAGTCC GGCGAAACCT TCACCATCAA CCTGACCGGC GCGGCCTCTT CGGACAACCG CAACGCCCAG GCACTGGTCG GTTTGCAGAC CAAACAGACC GTTGACACCG GCACGGCGAG CAAGGGCATC AGCCTGACCG ACGCTTACAA CAAACTGGTA ACCAACGTCG GTACCCAGGC TGCCCAGAGC AAATCCGACA GCGCAGCCAC CACGGTGATC CTGGATCAGG CCCAGGGTGC ACGGGACTCG CTGTCCCAGG TCAACCTGGA TGAAGAGACC GGCAACCTGG TCAAGTATCA GCAGTACTAC ACAGCGTCTT CGCAGATCAT CAAAGCTGCG CAGGAAACCT TCGCCACGCT GATCAACAGC CTTTAA
|
Protein sequence | MSLLNIGMSG LAASSSSLAV TGNNIANVDT AGYSRQQTVQ GTKSSIQYGN VFIGTGTTLA DVRRVYNSYL ESQLRTATSL NSEAAAFGAQ ATALDGSLSD TNTGLTGVLQ KFFTSMQGVS TSATDDTSRQ SVLTGAQALT SRFNALAKQM NDQNATLNGN LSDMASQVNK LATSIATLNQ KIGEISTSGG QPNDLLDSRN EAVRQLSELT GAQVVERGTS FDIYIGSGQP LVIGNTTNTL STVPLKGDPS RMGIQMDRGS STIDITSAMT GGEIGGLLTY RKEVLDPALN ELGRVALVVA DQINRQQAQG IDKNGDFGAA IFNNINSAAL ISQRSIAQSG NSAGSGNLDV TIKDTGKLTT SDYQVTFTSA TNYTVKRSDG TDMGSFSTTT TPPPVIDGFT LALNGGALSA GDTFKVTPTR NAASSIQTVL TDPKKIAAAG PLTGVASANN SGTYTQPTLT DVVDIYNPAS QAELQNALKY STPVKLVFGA TTSGSQTYNM VDAKGATIGS GVIVPGQANT LNLKIGMVDS TGAPVMDTTV IPNVQKTFTV QTTVGATPKS GETFTINLTG AASSDNRNAQ ALVGLQTKQT VDTGTASKGI SLTDAYNKLV TNVGTQAAQS KSDSAATTVI LDQAQGARDS LSQVNLDEET GNLVKYQQYY TASSQIIKAA QETFATLINS L
|
| |