Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1493 |
Symbol | |
ID | 3717093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1671884 |
End bp | 1673302 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | amino acid permease-associated region |
Protein accession | YP_347225 |
Protein GI | 77457720 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.17228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGAC AAAACTCGCA ATCAGGCGAG CTGAAACGCG GCCTGAAAAA TCGCCACATT CAACTGATCG CCCTCGGTGG CGCGATCGGT ACCGGATTGT TCCTCGGTTC GGCCGGGGTG CTGAAATCCG CCGGCCCGTC GATGATCCTC GGCTATGCCA TCTGCGGCTT CATCGCCTTC ATGATCATGC GCCAGCTGGG CGAAATGATC GTCGAAGAGC CGGTGGCCGG ATCCTTCAGC CACTTTGCGC ACAAATACTG GGGCGGTTTC GCCGGCTTCC TGTCGGGCTG GAACTGCTGG ATCCTGTACA TCCTGGTGGG CATGTCGGAG CTGACCGCGG TCGGCAAATA CATCCACTAC TGGGCGCCGG AGATCCCGAG TTGGGTCACT GCCGCGGCGT TCTTCGTGCT GATCAATGCG ATCAACCTGG CCAACGTCAA AGTCTTCGGT GAAGCCGAAT TCTGGTTCGC GATCATCAAG GTCGTGGCGA TCGTCGGCAT GATCGCCCTG GGCAGCTACC TGCTGGTCAG CGGCCATGGC GGCCCGCAGG CTTCGGTCAG CAACCTGTGG TCCCACGGTG GTTTCTTCCC GAACGGCGTC AGCGGTCTGG TGATGGCCAT GGCGATCATA ATGTTCTCCT TTGGCGGTCT GGAAATGCTC GGTTTCACCG CAGCCGAAGC CGACAAGCCG AAAACCGTGA TCCCGAAAGC GATCAACCAG GTGATCTACC GGATCCTGAT TTTCTACATC GGCGCACTGG TGATCCTGTT GTCGCTGACT CCGTGGGACA GTCTGCTGGA AACCCTCAAC GCTTCTGGCG ATTCCTACAG CGGCAGCCCG TTCGTGCAGG TGTTCTCGAT GCTCGGCAGC AACACCGCTG CGCACATCCT CAACTTCGTG GTCCTGACCG CGGCATTGTC GGTGTACAAC AGCGGCACCT ACTGCAACAG CCGCATGCTG CTGGGCATGG CCGAGCAGGG CGATGCGCCG AAAGCGCTGG CGAAGATCGA CAAGCGCGGC GTGCCGGTGC GTTCGATCCT GGCCTCGGCG GCCGTGACTC TGGTGGCGGT GCTGCTCAAC TACCTGATCC CGCAACACGC GCTGGAACTG CTGATGTCGC TGGTGGTTGC AACGCTGGTG ATCAATTGGG CGATGATCAG CTTCTCGCAC TTCAAGTTCC GCCAGCACAT GAACAAGACC CACCAGAAGC CGCTGTTCAA GGCGCTGTGG TACCCGTACG GCAATTACAT CTGCCTGGCG TTCGTCCTGT TCATCCTCGG CGTGATGCTG CTGATCCCGG GCATTCAGAT CTCGGTGTAC GCGATTCCGG TGTGGGTGGT GTTCATGTGG ATCTGCTACG TGATCAAGAA CAAACGTGGC GCGCAGCAGG CACTGCACGC AGCGAGCGCA GCCAAGTAA
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Protein sequence | MSGQNSQSGE LKRGLKNRHI QLIALGGAIG TGLFLGSAGV LKSAGPSMIL GYAICGFIAF MIMRQLGEMI VEEPVAGSFS HFAHKYWGGF AGFLSGWNCW ILYILVGMSE LTAVGKYIHY WAPEIPSWVT AAAFFVLINA INLANVKVFG EAEFWFAIIK VVAIVGMIAL GSYLLVSGHG GPQASVSNLW SHGGFFPNGV SGLVMAMAII MFSFGGLEML GFTAAEADKP KTVIPKAINQ VIYRILIFYI GALVILLSLT PWDSLLETLN ASGDSYSGSP FVQVFSMLGS NTAAHILNFV VLTAALSVYN SGTYCNSRML LGMAEQGDAP KALAKIDKRG VPVRSILASA AVTLVAVLLN YLIPQHALEL LMSLVVATLV INWAMISFSH FKFRQHMNKT HQKPLFKALW YPYGNYICLA FVLFILGVML LIPGIQISVY AIPVWVVFMW ICYVIKNKRG AQQALHAASA AK
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