Gene Pfl01_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1479 
Symbol 
ID3717118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1659774 
End bp1661228 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content63% 
IMG OID 
ProductK+ transporter Trk 
Protein accessionYP_347211 
Protein GI77457706 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0756741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.260835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGC CGACCTTACG GATCATTGGT TTCATCATCG GCATCTTCCT GATCACCCTG 
GCCATCGCCA TGGTCGTGCC CATGGCCACC CTGGTGATTT TCGAGCGCAC CGGCGATCTG
CCGTCGTTCC TCTGGGCGAG CATGATCACC TTCGTCGCCG GCCTCGCGCT GGTGATTCCG
GGGCGTCCGG AACACATCCA CCTGCGCCCC CGGGACATGT ACCTGCTGAC CGTCAGCAGC
TGGCTGGTGG TGTGCATCTT TGCCGCGCTG CCGTTTTTGC TGACCCAGCA CATCAGCTAC
ACCGACTCGT TCTTCGAAAG CATGTCCGGC ATCACGGCCA CCGGGTCGAC CGTGCTCAAC
CACCTGGACG ACATGTCCCC CGGCATCCTG ATGTGGCGCT CGCTGCTGCA CTGGATCGGC
GGCATCGGCT TCATCGGCAT GGCGGTGGCG ATCCTGCCGC TGCTGCGCAT CGGTGGCATG
CGCCTGTTCC AGACCGAATC CTCGGACCGC TCGGAAAAGG TCATGCCCCG CTCGCACATG
GTGGCGCGGC TGATCGTGGC GGCCTACGTC GGCATCACGA TTCTCGGCAG CCTGGCGTTC
TGGTGGGCCG GGATGAGCCC GTTCGATGCG ATCAACCACG CGATGTCAGC GATTTCCACA
GGCGGGTTCT CGACCTCCGA CCAGTCCCTG GCCAAGTGGA CGCAACCGGC GGTGCACTGG
GTGGCCGTGG TGGTGATGAT TCTCGGCAGT CTGCCGTTCA CCCTGTACGT GGCGACGCTG
CGCGGCAACC GTCGGGCGCT GATCAAGGAT CAACAGGTGC AGGGTTTGCT CGGGATGTTG
CTGGCGACCT GGCTGGTGCT CGGCACCTGG TACTGGTGGA CTACCAATCT GCATTGGCTG
GACGCGCTGC GGCATGTGGC GCTGAACGTG ACGTCGGTGG TCACTACCAC CGGATTTGCG
CTGGGGGACT ACAGCCTGTG GGGCAACTTC TCGCTGATGC TGTTCTTCTA TCTGGGCTTC
GTCGGCGGCT GCTCCGGCTC GACGGCGGGC GGGATCAAGA TCTTCCGTTT CCAGGTCGCC
TACATCCTGC TCAAGGCCAA CCTTAACCAG TTGATTCACC CGCGTGCGGT GATCAAACAG
AAGTACAACG GTCACCGCCT CGACGAAGAG ATCGTCCGTT CGATTCTGAC CTTTTCGTTC
TTCTTCGCCA TCACCATCTG CGTGATCGCC CTGTTGCTGT CGCTGTTGGG CGTGGACTGG
ATGACGGCGT TGACCGGCGC CGCCAGCACC GTCTCCGGCG TAGGTCCGGG CCTGGGCGAG
ACCATCGGCC CGGCCGGCAA CTTCGCCAGC CTGCCGGATG CGGCCAAATG GATTCTGTCG
TTCGGCATGC TGCTCGGCCG ACTGGAGATC ATTACGGTGT TTGTACTGTG TATTCCGGCG
TTCTGGCGTC ACTGA
 
Protein sequence
MALPTLRIIG FIIGIFLITL AIAMVVPMAT LVIFERTGDL PSFLWASMIT FVAGLALVIP 
GRPEHIHLRP RDMYLLTVSS WLVVCIFAAL PFLLTQHISY TDSFFESMSG ITATGSTVLN
HLDDMSPGIL MWRSLLHWIG GIGFIGMAVA ILPLLRIGGM RLFQTESSDR SEKVMPRSHM
VARLIVAAYV GITILGSLAF WWAGMSPFDA INHAMSAIST GGFSTSDQSL AKWTQPAVHW
VAVVVMILGS LPFTLYVATL RGNRRALIKD QQVQGLLGML LATWLVLGTW YWWTTNLHWL
DALRHVALNV TSVVTTTGFA LGDYSLWGNF SLMLFFYLGF VGGCSGSTAG GIKIFRFQVA
YILLKANLNQ LIHPRAVIKQ KYNGHRLDEE IVRSILTFSF FFAITICVIA LLLSLLGVDW
MTALTGAAST VSGVGPGLGE TIGPAGNFAS LPDAAKWILS FGMLLGRLEI ITVFVLCIPA
FWRH