| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1427 |
|---|
| Symbol | |
|---|
| ID | 3717183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1602440 |
|---|
| End bp | 1604272 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter-like |
|---|
| Protein accession | YP_347159 |
|---|
| Protein GI | 77457654 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.582294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.104251 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTATC GCCGTTTCGA ACAACTGATC GACATATTCC GCGACGCCCC GACGGCGTCT
CCGCCGGACC GCGTTCTGCC CTTCTATACC TATTACCTGA AGCAGGTCTG GCCGAGTTTC
GCCGCCCTGC TGATCGTCGG CCTGTTCGGT GCACTGATCG AAGTGGCGCT GTTCAGCTAC
CTGAGTCGCA TCATCGACCT CGCCCAGGGT ACGCCGAACG TCGACTTCTT CAAGGTGCAC
GGCGTCGAAC TGGCGTGGAT GGCGGTGGTA GCGTTACTGC TGCGCCCGCT GTTCCTGGCG
CTGCACGACA TGCTGGTGCA CCAGACCCTG AGCCCGAGCA TGACCAGCAT GATTCGCTGG
CAGAACCACA GTTACGTGCT CAAGCAGAGC CTGAATTTCT TCCAGAACGA CTTCGCCGGG
CGCATTGCCC AGCGCATCAT GCAGACCGGC AACTCGCTGC GCGATTCCGC CGTGCAAGCG
GTGGATGCGC TGTGGCACGT GCTGATCTAC GCGATCAGTT CGCTGGTGCT GTTCGCCGAG
GCCGACTGGC GCCTGATGAT CCCGCTGCTG ACGTGGATCG CCGCCTACAT CGGCGCGCTC
TATTACTTCG TGCCACGGGT CAAGAACCGC TCGGTGGAAG CCTCCGATGC GCGCTCGAAG
CTGATGGGCC GGATCGTCGA CGGCTACACC AACATCGCCA CCCTGAAGCT GTTCGCCCAC
ACCAATTTCG AACAGCACTA CGCCCGCGAA GCGATCCAGG AACAGACCGA AAAAGCCCAG
CTGGCCGGCC GCGTGGTCAC CAGCATGGAC GTGGCCATCA CCACCATGAA CGGCCTGTTG
ATCGTCGGCA CCACGGCGCT GGCCCTGTGG CTGTGGACGC AATCGCTGAT CAGCGTCGGC
GCGATCGCCC TGGCCACCGG TCTGGTGATC CGCATCGTCA ACATGTCCGG CTGGATCATG
TGGGTGGTCA CCGGGATCTT CGAAAACATC GGCATGGTTC AGGATGGTCT GCAGACCATC
TCGCAACCGG TCAGCGTCAC CGACCGGGAG CAGGCCAAAC CGCTGGCCGT CGCCCGTGGC
GAAGTGCGTT TCGAGCACGT GGATTTTCAC TACGGCAAGA AGAAAGGCAT CATCGGCGAC
CTTAACCTGA CCATCAAACC GGGCGAGAAA ATCGGTTTGA TCGGCCCGTC CGGCGCCGGC
AAATCGACCC TGGTCAACCT GCTGTTGCGC CTGTACGACG TCGAGGGCGG GCGGATCCTG
ATCGACGGCC AGAACATCGC CGAAGTCGGC CAGGAAAGCC TGCGCGCACG GATCGGCATG
ATCACTCAGG ACACCTCGCT GCTGCACCGC TCGATCCGCG ACAACTTGCT GTACGGCAAG
CCCGACGCCA CTGACGCGGA GCTCTGGGAA GCGGTGCGCA AGGCTCGCGC CGATGAGTTC
ATCCCGTTGT TGTCGGACGC CGAAGGACGC ACCGGGTTCG ATGCGCATGT CGGCGAACGC
GGGGTGAAAC TGTCCGGTGG TCAGCGTCAG CGGATCGCGA TTGCGCGGGT GCTGCTCAAG
GACGCGCCGA TCCTGATCAT GGACGAAGCG ACCTCGGCCC TGGACTCGGA AGTCGAAGCG
GCGATCCAGG AAAGCCTGGA AACCCTGATG CAGGGCAAGA CCGTGATCGC CATCGCTCAC
CGCCTCTCGA CCATTGCCCG CATGGACCGA CTGGTGGTGC TGGAGAACGG CAAGATCGCC
GAAAGCGGCA ACCATGCCGA ACTGCTGGCC CATGGCGGAT TGTATGCGCG GTTGTGGGCG
CACCAGACCG GAGGGTTTGT CGGCATCGAC TGA
|
|---|
| Protein sequence | MLYRRFEQLI DIFRDAPTAS PPDRVLPFYT YYLKQVWPSF AALLIVGLFG ALIEVALFSY
LSRIIDLAQG TPNVDFFKVH GVELAWMAVV ALLLRPLFLA LHDMLVHQTL SPSMTSMIRW
QNHSYVLKQS LNFFQNDFAG RIAQRIMQTG NSLRDSAVQA VDALWHVLIY AISSLVLFAE
ADWRLMIPLL TWIAAYIGAL YYFVPRVKNR SVEASDARSK LMGRIVDGYT NIATLKLFAH
TNFEQHYARE AIQEQTEKAQ LAGRVVTSMD VAITTMNGLL IVGTTALALW LWTQSLISVG
AIALATGLVI RIVNMSGWIM WVVTGIFENI GMVQDGLQTI SQPVSVTDRE QAKPLAVARG
EVRFEHVDFH YGKKKGIIGD LNLTIKPGEK IGLIGPSGAG KSTLVNLLLR LYDVEGGRIL
IDGQNIAEVG QESLRARIGM ITQDTSLLHR SIRDNLLYGK PDATDAELWE AVRKARADEF
IPLLSDAEGR TGFDAHVGER GVKLSGGQRQ RIAIARVLLK DAPILIMDEA TSALDSEVEA
AIQESLETLM QGKTVIAIAH RLSTIARMDR LVVLENGKIA ESGNHAELLA HGGLYARLWA
HQTGGFVGID
|
|---|
| |