Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1388 |
Symbol | |
ID | 3717221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1561967 |
End bp | 1563100 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | ribonuclease D |
Protein accession | YP_347120 |
Protein GI | 77457615 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCATCG ATATTCACTG GATTCGCGAC AACGATAGCC TCGCGCAGTT TTGCGCCGAG TGGCAGCAGC TGCCGTTCGT TGCCCTCGAC ACCGAATTCA TGCGGGTCGA CACCTTCTAT CCGATTGCCG GCCTGTTGCA GGTCGGCGAC GGCAAACGCG CCTACCTGAT CGACCCGCTG ACCATCAACG CCTGGCAGCC CTTGGCCGCG TTGCTGGAAA ACCCGGCGGT GCTCAAAGTC CTGCACGCCT GCAGCGAAGA CCTCGAAGTC CTGCTGCGCC TGACCGGCAG CCTGCCGGCG CCGCTGTTCG ACACCCAACT GGCCGCTGCC TACCTGAACC TCGGGTTCTC GATGGGCTAT TCGCGTCTGG TGCAGGAAGT GCTGGGCATC GAACTGCCGA AGGGCGAAAC CCGGTCCGAC TGGTTGCAGC GTCCGTTGTC CGACACGCAA ATCAGCTATG CCGCCGAAGA CGCCGTGCAT CTGGCGGAGG TTTTCGTACA ACTGCGTCCG AAACTGTCCG ACGACAAATT CGCCTGGGTG CTGGAGGACG GCGCCGAACT GGTCGCCAAC CTGCGCCGCG AGACCGATCC GTACGAGGTG TATCGCGAGG CCAAACTGGC GTGGAAGCTG TCTCGCGCCC AACTGGCTGT GCTGCGCGAA TTGTGCGCCT GGCGTGAGCG CGAGGCCCGC GCCCGCGACC TGCCGCGCAA TCGCATCGTG CGTGAACACT CGCTGTGGCC GCTGGCCCGG ACCCAACCGG ACAACCTCAG CGCGCTGGGC AAGATCGAAG ACATGCACCC GCGTACCGTG CGTCAGGACG GCGAGTTTCT GCTTGATCTG ATCAAGCGCT CTGGCAGTGT GGGGCCTGAT CAATGGCCGC CAGCCGTGCC GGAGCCGTTG CCGATCGAAG CCGCCGCGCT GATCAAACAG CTGCGGGCGC TCGGTCAGGC CGAAGCCGAA CGTCTGGGCA TCGCGCCGGA ACTGATGCTG CGCAAGAAAA CCCTCGAAGC GCTGGTCAAA AGCGGCTTCC CCGAGGGCCC TTACCAATTG CCTGATTCGC TGCGTGGCTG GCGCCGCGAA TTGATGGGCC AGAAGCTGCT CGACAGCCTG GCCACCGCCG GAGAACAGCC TTGA
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Protein sequence | MAIDIHWIRD NDSLAQFCAE WQQLPFVALD TEFMRVDTFY PIAGLLQVGD GKRAYLIDPL TINAWQPLAA LLENPAVLKV LHACSEDLEV LLRLTGSLPA PLFDTQLAAA YLNLGFSMGY SRLVQEVLGI ELPKGETRSD WLQRPLSDTQ ISYAAEDAVH LAEVFVQLRP KLSDDKFAWV LEDGAELVAN LRRETDPYEV YREAKLAWKL SRAQLAVLRE LCAWREREAR ARDLPRNRIV REHSLWPLAR TQPDNLSALG KIEDMHPRTV RQDGEFLLDL IKRSGSVGPD QWPPAVPEPL PIEAAALIKQ LRALGQAEAE RLGIAPELML RKKTLEALVK SGFPEGPYQL PDSLRGWRRE LMGQKLLDSL ATAGEQP
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