Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1379 |
Symbol | |
ID | 3717212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1551932 |
End bp | 1552954 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | glycosyl transferase family protein |
Protein accession | YP_347111 |
Protein GI | 77457606 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.603449 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTCGA ACAGCGTTCG GCGACCGACA ATCACTATAA GAAAGAGCAG TCCATTGACC CATCCGCACG GAACGCAACA CGCGGGCCCG GTGAAGTTGT CGCTGGTGAT CCCCGTATTC AATGAAGAGG ACAGCCTCGA CGGTTTTCTC CTGCGCATTC GTCAGGTTTT CGAGCAAGAG ACGCTGGTCG AACTGGAACT GGTGTTCGTC AATGACGGCA GTTCCGATAC AACGCTGGAG CGCTTGCTGA ACTGCCAGCA GAGCGACTCG CGCATCCGTA TCGTCGATCT GAGCCGCAAT TTCGGCAAGG AAGCGGCGCT GTCCGCCGGT TTGCAGACGG CCACCGGGCA AATCGTGGTG CCGATCGATG TCGATCTGCA GGATCCGCCC GAGGTCATCC TGCAAATGAT CGAGCGCTGG CGCGAAGGGT TTGAAGTGGT GCTTGGCCAC CGCATCAGTC GGCGCAACGA CTCCTGGGCC AAGCAGACTT CCGCCGGTTG GTTCTATCGC CTGCACAACA AAATTGCCGA ACAGGCATTA CCGGAAAACG TCGGTGATTT CCGGCTGATG GATCGCTGCG TGGTCGACGC GCTGCTGACA CTGCCCGAAT CCCGACGCTT CATGAAAGGC CTGTTCGCCT GGGTCGGATT TCGCACCACC CAGGTCGAGT ACGAACGCCC GGAGCGGGCA GCGGGGCAGA GCAAGTTCAA TGGCTGGCGG CTGTGGAATT TCGCCCTGGA GGGCATCACC AGTTTCAGCA CCGAACCGTT GCGGATCTGG ACGTATCTGG GAGCGCTGGT CTCTCTGGTG TCGTTCGCCT TTGCGATGTT CATTGTGGTG CGCACGCTGA TCCATGGCGT CGACATGCCC GGTTACGCCT CGCTGATGGT TGCCGTGACG TTTCTCGGCG GTTTGCAGTT GATTGGCATC GGTGTGCTCG GCGAGTATCT GGGCCGCACT TATATCGAAG CGAAGCGCCG GCCGGTTTTC CTGGTGCGCC GCATCTACGA ATCCAAGGAC TGA
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Protein sequence | MASNSVRRPT ITIRKSSPLT HPHGTQHAGP VKLSLVIPVF NEEDSLDGFL LRIRQVFEQE TLVELELVFV NDGSSDTTLE RLLNCQQSDS RIRIVDLSRN FGKEAALSAG LQTATGQIVV PIDVDLQDPP EVILQMIERW REGFEVVLGH RISRRNDSWA KQTSAGWFYR LHNKIAEQAL PENVGDFRLM DRCVVDALLT LPESRRFMKG LFAWVGFRTT QVEYERPERA AGQSKFNGWR LWNFALEGIT SFSTEPLRIW TYLGALVSLV SFAFAMFIVV RTLIHGVDMP GYASLMVAVT FLGGLQLIGI GVLGEYLGRT YIEAKRRPVF LVRRIYESKD
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