Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1343 |
Symbol | |
ID | 3717290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1519156 |
End bp | 1520223 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | ABC transporter, periplasmic substrate-binding protein |
Protein accession | YP_347075 |
Protein GI | 77457570 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.43971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGAC TACGCTTGCC CGCCCTGCTC GCCGCCGCGT TCGCCGCGCT GATCAGCACT CAATCCCCCG CCGCGCAGAA AGACCACTTC AGCGTCTGCT GGACGATCTA TGCCGGCTGG ATGCCATGGG AATACGCCGG CAGCCAGGGC ATCGTCGACA AATGGGCGAA GAAGTACGGG ATCAAGATTG ATGTCGTGCA ACTCAACGAT TACGTCGAGT CGATCAACCA GTACACCGCC GGCCAGTTCG ACGGCTGCAC CATGACCAAC ATGGATGCCC TGACCATTCC GGCCGCCGGC GGCGTCGACA GCACCGCGCT GATCGTCAGC GACTTTTCCA ACGGCAACGA CGGCATCGTC CTCAAGGGCG AAGGCAAAAA AGTTGCCGAC CTCAAGGGCA TGGACGTCAA CCTGGTCGAG CTGTCGGTTT CCCACTACCT GCTGGCTCGG GCACTGGATT CGGTCGATCT GACCGAAAAA GACCTGAAAG TGGTCAACAC CTCCGACGCC GACATTTCCG CCGCCTTCAA CACCGAGCAG GTCAACGCCG TCACCACCTG GAACCCGATG CTTTCGGACA TCAAGGCCAA ACCGGGCGTG ACCGAAGTCT TCAACTCCAG CCAGATCCCC GGCGAAATCA TGGACATGAT GGTGGTCAAC AGTGCCACCC TCAAAGACAA CCCGGCGCTG GGCAAGGCAC TGACCGGCGC GTGGTTCGAA GTGGTCGACT TGATGAACGC CAAGAACGCC GCCAGCAAAG CCGCACTTGA GCACATGGCC AAGGCCTCGG GCACCGACCT GGCCGGATTC CAGGCGCAAC TGGACACCAC CAAGCTGTTC GCCACACCGA AAGAAGCCCT GGCGTTCGCC ACCAGCAAGC AACTGCCGGA AACCATGCGC AAGGTCGCCG AGTTCTCGTT CCAGCACGGT TTGCTCGGTG AAGGCGCGAA AGACACCAGC GCGGTCGGCA TGACCTTCGC CAACGGCGTG ACGAGCGGCG ACACCGGCAA CCTCAAGCTG CGTTTCGATC CGACCTACGT GCAGATGGCC GCCGACGCCA AGCTGTAA
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Protein sequence | MSRLRLPALL AAAFAALIST QSPAAQKDHF SVCWTIYAGW MPWEYAGSQG IVDKWAKKYG IKIDVVQLND YVESINQYTA GQFDGCTMTN MDALTIPAAG GVDSTALIVS DFSNGNDGIV LKGEGKKVAD LKGMDVNLVE LSVSHYLLAR ALDSVDLTEK DLKVVNTSDA DISAAFNTEQ VNAVTTWNPM LSDIKAKPGV TEVFNSSQIP GEIMDMMVVN SATLKDNPAL GKALTGAWFE VVDLMNAKNA ASKAALEHMA KASGTDLAGF QAQLDTTKLF ATPKEALAFA TSKQLPETMR KVAEFSFQHG LLGEGAKDTS AVGMTFANGV TSGDTGNLKL RFDPTYVQMA ADAKL
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