Gene Pfl01_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1340 
Symbol 
ID3717287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1516798 
End bp1517523 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_347072 
Protein GI77457567 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.340064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATT CGACCCAACT GTTTCCACCC TTCGCCGAGG AAACCCTGCC CGGTGGCGGC 
CACCGTTCCT TCGTCCTGAA ACGCGGCCAG CTGCTGCGCC TGACCGACCT GCGCGGTGGG
GCCAACGTCA GCCTGACCCT GCTCAACGCC AACGAGAAAA CCGAGCGCCT GAACCTGCCC
GACAGCCTCA AGTGCCAACA CACCGCCAAG CTGACCGCAG GCCATTGCCT GTACTCGGAC
ATGGGCCGCG TGCTGGCGGC AATCACCGCA GACACTTGTG GCTGGAGCGA CAGCCTCGGC
GGCGTGCTGT GCGCTGAAGA GGTCGCCGAA AAATATGGCC AGGGCCGCTA TCAGGAACTG
CGCAACGGCT TCTTTCGCAA CGGCACCGAC AACCTGCTGG TGGAACTGGG CAAGTGGGGC
CTGGGCCTAT CCGATCTGCT GATGACCCTC AACCTGTTCA GCCGGGTCAA CGTCGATGAC
GCCGGACGCT TCCATTTCGT CGAGGGCCAT TCGCAGGCCG GTGACTACAT CGAACTGTAT
GCACCGATGG ATACCCTCGT CGTCCTCACT GCCCTGCAAC ACCCGATGGA CCCGTCGCCC
AACTACGCGC CAAAACCGCT GAAGCTGAGC TGGATGAACG CCGACGCCAG CGTCGCCGAG
CACTGCCGTA CCTCGCGCCC GGAGAACGAG CGCGGCTTTA TCAACACCGA CCGTTTGTTC
GCCTGA
 
Protein sequence
MTDSTQLFPP FAEETLPGGG HRSFVLKRGQ LLRLTDLRGG ANVSLTLLNA NEKTERLNLP 
DSLKCQHTAK LTAGHCLYSD MGRVLAAITA DTCGWSDSLG GVLCAEEVAE KYGQGRYQEL
RNGFFRNGTD NLLVELGKWG LGLSDLLMTL NLFSRVNVDD AGRFHFVEGH SQAGDYIELY
APMDTLVVLT ALQHPMDPSP NYAPKPLKLS WMNADASVAE HCRTSRPENE RGFINTDRLF
A