Gene Pfl01_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1314 
Symbol 
ID3717351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1489164 
End bp1490357 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_347046 
Protein GI77457541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCC CTTTGAGTGC GATCAAAGTG ATCGAAATCG GCACCCTGAT CGCTGCGCCG 
TTTGCCGCGC GCATGCTCGC CGAATTCGGC GCCGAAGTGA TCAAGATCGA AGCCATGGGT
CAGGGCGACC CGCTGCGCAA ATGGCGCAAG CTGCACGAAG GGACGTCGCT GTGGTGGTAC
CTGCAATCGC GCAACAAGAA ATCCCTGGCG CTCAATCTGA AATCCGCCGA AGGCATCGAG
CTGGTCAAGC AACTGGCGCG CGATGCCGAC GTGATCATCG AAAACCTGCG CCCCGGCGCC
CTGGAAAAAC TTGGCCTGGG CTGGAACGTG CTGCACGGCC TGAACCCCAA CTTGACCCTG
GTGCGCATTT CCGGCTACGG CCAGACCGGC CCCTACCGTG ACCGCCCCGG TTTCGGTGCG
ATCGGCGAGG CCATGGGGGG CATTCGCTAC ACCACCGGCA CTCCCGGTTC ACCGCCGGCG
CGGGTCGGAG TCAGCCTCGG CGACTCACTG GCTTCGCTGC ACGCGGTGAT CGGCGCGCTG
ATGTCGCTGC TGCGGGTCAA GACCGGGCAG GGCGGCGGGC AGGTTGTCGA TGTGTCGCTG
GCCGAAAGCG TGTTCAACGT CATGGAAAGC CTGGTGCCGG AATACGACAT GCTCGGCCAT
GTCCGCGAAC GCAGTGGCGG CGCGTTGCCG GGCATCGCAC CTTCCAATAC TTACCTCACG
GCTGACGGCG CCTACGTGGT GATCGCCGGC AACAGCGACC CGATCTACAA GCGCCTGATG
CAGGTGATCG GTCGGGATGA TCTGGCCGAA GCCGAAGAAT TCGCCCACAA CGACGGTCGT
GCCGCAAAGA GCGGTCTGCT CGACGCTGCC ATCACCCACT GGACGAGCAG CCTGCCGATC
GATGACGTAT TGGCGGCGCT GGAAGCCGCC GAAGTGCCGG CTGGCCGCAT CTACTCGGTG
GCCGATATCG TTGCCGATCC GCACTATCAG GCCCGGGACA TGTTGCTTGA CGCCGCGTTG
CCCGGCGGGG CGACCGTGAA GATGCCGGGC ATCGTGCCCA AACTCTCGGA AACCCCCGGT
GGTGTGAACT GGTCGGGCCC CGGCCTCGGT CAGCACACCG ATGGCATCCT CGCCGGTCTC
GGCCTGACCG CTTCTGACAT CGAACGCCTG AAAAACCGGG GGGTGGTGCA ATGA
 
Protein sequence
MTAPLSAIKV IEIGTLIAAP FAARMLAEFG AEVIKIEAMG QGDPLRKWRK LHEGTSLWWY 
LQSRNKKSLA LNLKSAEGIE LVKQLARDAD VIIENLRPGA LEKLGLGWNV LHGLNPNLTL
VRISGYGQTG PYRDRPGFGA IGEAMGGIRY TTGTPGSPPA RVGVSLGDSL ASLHAVIGAL
MSLLRVKTGQ GGGQVVDVSL AESVFNVMES LVPEYDMLGH VRERSGGALP GIAPSNTYLT
ADGAYVVIAG NSDPIYKRLM QVIGRDDLAE AEEFAHNDGR AAKSGLLDAA ITHWTSSLPI
DDVLAALEAA EVPAGRIYSV ADIVADPHYQ ARDMLLDAAL PGGATVKMPG IVPKLSETPG
GVNWSGPGLG QHTDGILAGL GLTASDIERL KNRGVVQ