Gene Pfl01_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1276 
Symbol 
ID3717391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1449010 
End bp1449825 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content61% 
IMG OID 
Producttrans-aconitate 2-methyltransferase 
Protein accessionYP_347008 
Protein GI77457503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.281343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC GACTCAACCC CGCTCCCGTC GACAAAGACT GGGACGCCAA GGCGTACCAG 
CAGTTTTCCC GTCTCAGGCA ACAACCGGTC GATGAATTGC TCGGCCGTGT CGACCTGGAA
AATCCCCAAC GCATTTATGA CCTGGGCTGC GGCACCGGGA TTGCCACAAA GATTCTGGCG
GATCGCTGGC CCGAGGCAGA GATCAAGGGC ATCGACAGTT CGAAAGACAT GCTTCAGGTC
GCCCGCTGCC TGCCGATCAA GGCGCGCTGG CAACACGCCG AACTGCAACA CTGGAAACCC
CGCAAGCCGG CCGACCTGTT GTTCGCCGCG GCCGTGCTGC ATTTCATCGA TGACCATCAA
ACGCTGTTGC CGGGACTGCT TCGCCACCTC AACCCCGGCG GGTGCCTCGC CGCGCACATG
CCGGACTGGC GTGATGCGCT GTGGTATCGG CTGATGCTCG GCACCCTCAA CGATGCCGGC
CCCTGCGGCC GCCCCATCGG CACTGCGCAA TTGCGCCAGC GCATGGCCGC GCGGACGTTG
TTGTCGCTGG AGGATTACTA CCGGCTGCTG GCTCCGCGGA CCCAGTCGCT GGATATCTGG
GAAACCGAGC AGTTGCAGGT CGTGCGCGGA AGCTCACCGA TTTATGACTG GGTGAAGGTG
TCGGCGCTGC GGCCGGTGAT GCAGGGACTG ACGTCAGAGG AACAGGCACG CTTCATTTAT
CACTACCTGA GGCGGGTGCA TGCGCACTAT CCGCAGGAGG AAAACGGCCA TACGTTGTTT
GCGTTCAAGC GGATTTTCAT TGTTGCCAAG GTATGA
 
Protein sequence
MITRLNPAPV DKDWDAKAYQ QFSRLRQQPV DELLGRVDLE NPQRIYDLGC GTGIATKILA 
DRWPEAEIKG IDSSKDMLQV ARCLPIKARW QHAELQHWKP RKPADLLFAA AVLHFIDDHQ
TLLPGLLRHL NPGGCLAAHM PDWRDALWYR LMLGTLNDAG PCGRPIGTAQ LRQRMAARTL
LSLEDYYRLL APRTQSLDIW ETEQLQVVRG SSPIYDWVKV SALRPVMQGL TSEEQARFIY
HYLRRVHAHY PQEENGHTLF AFKRIFIVAK V