Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1276 |
Symbol | |
ID | 3717391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1449010 |
End bp | 1449825 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | trans-aconitate 2-methyltransferase |
Protein accession | YP_347008 |
Protein GI | 77457503 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.281343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCC GACTCAACCC CGCTCCCGTC GACAAAGACT GGGACGCCAA GGCGTACCAG CAGTTTTCCC GTCTCAGGCA ACAACCGGTC GATGAATTGC TCGGCCGTGT CGACCTGGAA AATCCCCAAC GCATTTATGA CCTGGGCTGC GGCACCGGGA TTGCCACAAA GATTCTGGCG GATCGCTGGC CCGAGGCAGA GATCAAGGGC ATCGACAGTT CGAAAGACAT GCTTCAGGTC GCCCGCTGCC TGCCGATCAA GGCGCGCTGG CAACACGCCG AACTGCAACA CTGGAAACCC CGCAAGCCGG CCGACCTGTT GTTCGCCGCG GCCGTGCTGC ATTTCATCGA TGACCATCAA ACGCTGTTGC CGGGACTGCT TCGCCACCTC AACCCCGGCG GGTGCCTCGC CGCGCACATG CCGGACTGGC GTGATGCGCT GTGGTATCGG CTGATGCTCG GCACCCTCAA CGATGCCGGC CCCTGCGGCC GCCCCATCGG CACTGCGCAA TTGCGCCAGC GCATGGCCGC GCGGACGTTG TTGTCGCTGG AGGATTACTA CCGGCTGCTG GCTCCGCGGA CCCAGTCGCT GGATATCTGG GAAACCGAGC AGTTGCAGGT CGTGCGCGGA AGCTCACCGA TTTATGACTG GGTGAAGGTG TCGGCGCTGC GGCCGGTGAT GCAGGGACTG ACGTCAGAGG AACAGGCACG CTTCATTTAT CACTACCTGA GGCGGGTGCA TGCGCACTAT CCGCAGGAGG AAAACGGCCA TACGTTGTTT GCGTTCAAGC GGATTTTCAT TGTTGCCAAG GTATGA
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Protein sequence | MITRLNPAPV DKDWDAKAYQ QFSRLRQQPV DELLGRVDLE NPQRIYDLGC GTGIATKILA DRWPEAEIKG IDSSKDMLQV ARCLPIKARW QHAELQHWKP RKPADLLFAA AVLHFIDDHQ TLLPGLLRHL NPGGCLAAHM PDWRDALWYR LMLGTLNDAG PCGRPIGTAQ LRQRMAARTL LSLEDYYRLL APRTQSLDIW ETEQLQVVRG SSPIYDWVKV SALRPVMQGL TSEEQARFIY HYLRRVHAHY PQEENGHTLF AFKRIFIVAK V
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