Gene Pfl01_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1220 
Symbol 
ID3717069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1391627 
End bp1392322 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content61% 
IMG OID 
ProductOmpA/MotB 
Protein accessionYP_346952 
Protein GI77457447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAG TTCGGACAGC ATTACCCTTG GTTCTGCTAA CCAGTGTGTT GACTGGTTGC 
GCAGGTTTGC AGAAAACCGA CTGGCCGACC TGTGCGGCAG TCGGTGGTGT CGTCGGTGCG
GGTCTCGGCG CGACCGAAAG CTCCGCATGG GCGGGGTATG GCGCGTTACT CGTCGGCGGT
ACGGCAGCAG CCTATTGCTG GGTTCACGGT GATGGCGACG AAGACGGCGA TGGTGTGCCG
GACAGTCGCG ACAAGTGCCC GGGCACGCCT AAAGGCGTAC AGGTCGATGC TGACGGCTGC
CCTCCACCAG CCCCTGCACC AGTGGTCGAA GAAGCTGTAG TGGTCAAGGA AGAAACCATT
GTCATCCGCG ATGTTCACTT CCAGTTCGAC AAGGCCACGT TGACCCCGGC CGACAAACTG
GTCCTGGATA AGGTCGCTTC GCGCCTGAAA CAGGAATCCA GCACGGCGCA ACTGACCGTG
ACCGGCCACA CCGACAGCGT CGGCAGCGAT GCCTACAACC AGAAACTGTC GGATCGCCGC
GCGCACTCGG TGGTCAAGTA CCTGGTTGAA AGCGGCGTAC CGCAAAGCAG CTTCGTGTCG
GTGACCGGTG CCGGTGAAAG CCAGCCGGTG GCAGACAACA AAACTGCCGA CGGTCGCGCG
CTGAACCGTC GTACCGAAAT CAAAATCAAC CGCTAG
 
Protein sequence
MSIVRTALPL VLLTSVLTGC AGLQKTDWPT CAAVGGVVGA GLGATESSAW AGYGALLVGG 
TAAAYCWVHG DGDEDGDGVP DSRDKCPGTP KGVQVDADGC PPPAPAPVVE EAVVVKEETI
VIRDVHFQFD KATLTPADKL VLDKVASRLK QESSTAQLTV TGHTDSVGSD AYNQKLSDRR
AHSVVKYLVE SGVPQSSFVS VTGAGESQPV ADNKTADGRA LNRRTEIKIN R