Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1197 |
Symbol | |
ID | 3716969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 1368425 |
End bp | 1370140 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | prolyl-tRNA synthetase |
Protein accession | YP_346929 |
Protein GI | 77457424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0778981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACCA GTCAATTTTT GCTCGCCACA CAGAAAGAAA CGCCTTCCGA CGCGGTCGTG ATCAGCCACC AGCTGATGCT GCGCGCCGGC ATGATCCGCA AACTCGCCTC GGGCCTGTAC ACCTGGCTGC CGATGGGCTT GCGAGTAATG CGCAAGGTGG AAGCGATCGT TCGCGAAGAA ATGGACGCCG CCGGCTCTCT GGAAGTGTTG ATGCCGAGCA CCCAACCGGC CGAGCTGTGG CAGGAATCGG GACGCTGGGA AGAATACGGC CCTGAGCTGC TGCGCATCAA AGACCGCCAC GGTCGTGATT TCTGCGCGGG CCCGACCCAC GAAGAAGTGA TCACCGATCT GATGCGCAAC GAGTTGAGCA GCTACAAACA GCTGCCGATC AACCTGTACC AGATCCAGAC CAAATTCCGT GACGAAATCC GTCCACGCTT CGGCCTGATG CGCGGTCGCG AATTCATCAT GAAGGACTCG TACTCCTTCC ATGCGGATCA GGCGTCGCTG CAGGTCACCT ATGACCGCAT GCACGATGCG TACTGCAACA TCTTCACCCG CCTGGGCCTG AAGTTCCGTC CGGTGGAAGC CGACAACGGT TCGATCGGTG GCGCCGGTTC CCACGAATTC CACGTGCTGG CCGAGTCCGG TGAAGACGAT ATCGTCTTCA GCAACGGCTC CGACTATGCG GCGAACATCG AGAAAGCCGA AGCCGTGCCG CGTGAAACCT CGCGCGCCGC GCCAAGCGAA GAGCTGCGTC TGGTCGACAC GCCAGACACC AAGACCATCG CGGCCCTGGT GGAGAAATTC AATCTGCCGA TTGAAAAGAC CATCAAGACC CTGATCGTGC ACGCCGAAGA AGAAGGCAAG CTGATCGCCC TGATCATCCG TGGCGACCAC GAGCTGAACG AAATCAAGGC TGCCAATCAG CCAGGCGTTG CCAGCCCGCT GGTCATGGCC TCCGATGCCG AACTGCGTGA CGCCATTGGC GCCGGCGCCG GTTCCCTCGG CCCGCTGAAC CTGCCGCTGC CGATCATCAT CGACCGTTCG GTCGAGCTGA TGAGCGACTT CGCCATCGGT GCCAACATCG ACGACAAGCA CTACTTCGGC GTGAACTGGG AGCGTGATCT GCCGGTTCCG ACCGTGGCCG ACCTGCGCAA CGTCGTGGCC GGCGACCCGA GCCCGGACGG CAAGGGCACC CTGGAAATCA AGCGCGGCAT CGAAGTCGGA CACATCTTCC AGCTGGGCAA CAAGTACAGC AAGGCGATGA AGTGCGAAGT GCTGGGCGAG AACGGCAAGC CGGTGACCCT GGAAATGGGT TGCTACGGTA TCGGCGTGTC CCGCGTGGTG GCTGCCGCCA TCGAGCAGAA CAACGACGAG AACGGCATCA TCTGGAGCGA CGCCCTGGCA CCGTTCCAGA TCGCTCTGGT GCCACTGCGC TATGAAACCG AGCTGGTGCG TGAAGCCACC GACAAGCTGT ACGCGGAACT GACCGCGGCC GGCTTCGAAG TGCTGCTGGA CGACCGCGAC AAGAAAACCA GCCCGGGCAT CAAGTTCGCG GACATGGAGC TGATCGGCAT TCCGCACCGG ATCGTGGTCA GCGACCGCGG CCTCGCCGAA GGCAACCTGG AATACAAGAG CCGTACCGAA GGCCAGGCGC AAGCGCTGCC GGTTGCCGAC GTGCTGTCCT TCCTTCAGGC CCGTATCCGC CGCTGA
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Protein sequence | MRTSQFLLAT QKETPSDAVV ISHQLMLRAG MIRKLASGLY TWLPMGLRVM RKVEAIVREE MDAAGSLEVL MPSTQPAELW QESGRWEEYG PELLRIKDRH GRDFCAGPTH EEVITDLMRN ELSSYKQLPI NLYQIQTKFR DEIRPRFGLM RGREFIMKDS YSFHADQASL QVTYDRMHDA YCNIFTRLGL KFRPVEADNG SIGGAGSHEF HVLAESGEDD IVFSNGSDYA ANIEKAEAVP RETSRAAPSE ELRLVDTPDT KTIAALVEKF NLPIEKTIKT LIVHAEEEGK LIALIIRGDH ELNEIKAANQ PGVASPLVMA SDAELRDAIG AGAGSLGPLN LPLPIIIDRS VELMSDFAIG ANIDDKHYFG VNWERDLPVP TVADLRNVVA GDPSPDGKGT LEIKRGIEVG HIFQLGNKYS KAMKCEVLGE NGKPVTLEMG CYGIGVSRVV AAAIEQNNDE NGIIWSDALA PFQIALVPLR YETELVREAT DKLYAELTAA GFEVLLDDRD KKTSPGIKFA DMELIGIPHR IVVSDRGLAE GNLEYKSRTE GQAQALPVAD VLSFLQARIR R
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