Gene Pfl01_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1166 
Symbol 
ID3716759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1339955 
End bp1341049 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346898 
Protein GI77457393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.8927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACC CAAAAAGCGT CCCCAGCGTC GGCCTGGTCG ATGGCCGGTT CGTCGATGAA 
AACCCGGTGG CGGGAACGCC GGGTTCATTG ATACCGGCGG TGTGGGGTAA CAGCGTTACA
CAAGAAATTC TCAACGTGAT TACCGGCGCC GGGCTGACAG CCGCCGAAGC CGATACCGGT
CAGTTGCTCA GAGCCATTCA ATCGATTGTC GGCAATGCCA GTCCTATGCG CTCAGTGGTG
ACACGGCTGA CGGCTTCCAA GGCGCTGACC GACCCGGAGC TGGGCCTGGT GCTGATCGAT
GGCGGATCCA GTGCCGTGAC GGTGACGTTG CCGCCGGCAA GCGCGGCGCT GGGTGTGCGC
GATGTGATTG TTCGGCGCAT GGATAACAGC GGCAACCGTC TGATCGTTCA GGCGTCAGGT
TCCGACCGCA TTCGTTTTCA CACGCACCTG TCACCCAGCG GTTATCCGTT TCTGGTGTTG
ATGGGCGGCG GGGACTGGTG GCAGTTGCGC AGCGATGCTG CGGGTAGCTG GTGGCCAGTC
GGCCGGTTCG ACAACACTCC ACTCGGCCGG CCGTTTTTTG AAACGACCAT CCTGCTCAGT
CCCGGTGGCT ACGGTGCGCT CAACGGTACA GTCATGAAGC GTGCCGAGTG GCCCTGGTTG
TGGGACCACG CGCAGCTATC CGGAATGTTG GGTACCGAAG CCGCTCGTGC GGGCAACGAA
GGTAAATGGA CGTCGGGTGA CGGTGCAGCA ACCTTTCGTG GCCCTGAAGG GCGTGGCGAG
TTTCTGCGAG TGCTGGACGA GGGGCGGGGC GTGGATGCGG CACGTGCGAT GGGTTCTTTT
CAGGTGGGCT CGACGCATTC GTATGCCATG GGCGCCAATG GTGCCGGAGC GGTCGGCGCG
TGGTGGTCGG ACAGCCTGAC GAGTTTTGGT GCCGATACTC GTGAAGAACC GCAATACGTG
TCCGGGCTGT ACAACGGTGG CCCGGTCTTC CCTGCCGGTA CGAGTTATCA GCGGGATGCC
GCCAACGCCC TGCTGCTGGC GTTCAAGTCG CGCCCTCGCA ACATCGCCTA TCCCGGCCGT
ATCAAGCTCA TCTGA
 
Protein sequence
MDYPKSVPSV GLVDGRFVDE NPVAGTPGSL IPAVWGNSVT QEILNVITGA GLTAAEADTG 
QLLRAIQSIV GNASPMRSVV TRLTASKALT DPELGLVLID GGSSAVTVTL PPASAALGVR
DVIVRRMDNS GNRLIVQASG SDRIRFHTHL SPSGYPFLVL MGGGDWWQLR SDAAGSWWPV
GRFDNTPLGR PFFETTILLS PGGYGALNGT VMKRAEWPWL WDHAQLSGML GTEAARAGNE
GKWTSGDGAA TFRGPEGRGE FLRVLDEGRG VDAARAMGSF QVGSTHSYAM GANGAGAVGA
WWSDSLTSFG ADTREEPQYV SGLYNGGPVF PAGTSYQRDA ANALLLAFKS RPRNIAYPGR
IKLI