Gene Pfl01_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1164 
Symbol 
ID3716757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp1338164 
End bp1339315 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_346896 
Protein GI77457391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATC CGAAGAGTGT CCCCAGCGCC GGTCTGGTGA ACGGGAAATT TATCGATGAG 
AACCCGCTGA CCGGGACGCC GGGGTCGTTG ATCCCCGCTG ACTGGGGCAA CAGTGTCACG
CAGGAAATTC TCAGCGTGAT CAAGGCCGGG GATCTTACCC CGGACGAGAA GAAATACGAT
CAGTTGTTGC AGGCGATTCA GACGGTGACG GCCAAAGGCT GGAATCAGGA TCTGGCGTTG
CCGCTGGCAG CATTGCCATT GCCGACCGTG GCCACGTCGG ATGCCCGGAT GCCGATCACA
CCGGCAGCCG CATCGACCAG TGGCGGGCGA GTTTCGGTGC CGGCGGGTGT TTACGTCAGC
ATCGGTCAGG AAGTGGTGGC GGGGCAGCTG GGACGTTCGC GAACGTTCAC CACTCAGGCC
TGGAGCAGCG CCGATCTGCT GCCGAGCTCG GGTTACTTTC TGCGGGCGCA GGTGGTGGGT
GGTGCGCTGA CGTTTTACAT GCAGCGCGGG ACGATTTATG ACGCCAGCCC CGATAGCTTG
AAGGGGACGG TCAATGGGGC GGCAGGTGGT GGTTTCCAGT CGACACCGCT GGATATTTGT
CTCGCCTGGG TCGTCACGGC GGGTCCGGGA TCCGTGCCGA TTGTCCGGCA GATCTACAAC
CGTAACCGGT TGTCCTGGAC TCAGGTGGTC AATGGCAATG GCGTGGTCTA TCTGCCGCTC
GACCCTCATG CTCGAACAGC ACGTCTGGTG GTCGGGAATC CGACCCCGCA CCCGACGGCT
ATCACTGGTG TGTCGTTTGC ACCGGGCGGC TGGCTGGGAG GGAATTACTG TTTCCTCAAT
CCGACTATCG GTACGTCCAA TAATTGGGAC GGCTGGGGAA CGGCAGGCGC ATCGGTGGGA
ATCTTCACCA GTAACGTCGT CAACGACACC ACGCTTTCAA CGTTGACGGC CGGTTTCGAT
CACTCGGAAC TGCGTTCGCT GTGGCAGGTG TACCAAGCCG AGCACACCTG GAACGCAGGG
AATGCCGTCA GTGACGAATT GCTATTCGGG ATGGGGATCA AAAGCTTTTC TCAAACCGAT
TATTCGAACG GCATCGCAGT CAATTTCACG GCGGCCGTGA ATGTGCATTT GTCTTGGGAG
TTGATCCGAT GA
 
Protein sequence
MDYPKSVPSA GLVNGKFIDE NPLTGTPGSL IPADWGNSVT QEILSVIKAG DLTPDEKKYD 
QLLQAIQTVT AKGWNQDLAL PLAALPLPTV ATSDARMPIT PAAASTSGGR VSVPAGVYVS
IGQEVVAGQL GRSRTFTTQA WSSADLLPSS GYFLRAQVVG GALTFYMQRG TIYDASPDSL
KGTVNGAAGG GFQSTPLDIC LAWVVTAGPG SVPIVRQIYN RNRLSWTQVV NGNGVVYLPL
DPHARTARLV VGNPTPHPTA ITGVSFAPGG WLGGNYCFLN PTIGTSNNWD GWGTAGASVG
IFTSNVVNDT TLSTLTAGFD HSELRSLWQV YQAEHTWNAG NAVSDELLFG MGIKSFSQTD
YSNGIAVNFT AAVNVHLSWE LIR