Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1115 |
Symbol | rnhB |
ID | 3716539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 1289051 |
End bp | 1289692 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | ribonuclease HII |
Protein accession | YP_346847 |
Protein GI | 77457342 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGA CAAGCATGCA GATGGGGCTG GATTTTACCC TGGTCGCCGA AGTCGAAGAA CTGGTGGCCG GTGTCGATGA AGTCGGTCGT GGCCCGCTGT GCGGCGCGGT CGTCACGGCC GCGGTTATCC TCGATCCGAA CCGCCCGATT CTCGGCCTCA ACGACTCGAA GAAACTCACC GAAGCCAAGC GCGAAAAGCT CTACGATGAA ATCTGCGAGA AGGCGCTGAG CTGGTGCATC GCCCGCGCCG AGGTCGAAGA AATCGACGAA CTGAACATCC TTCACGCCAC CATGCTGGCG ATGCAGCGCG CTGTCGCTGG CCTGCACATC CAGCCGAAAC TGGCGATGAT CGACGGCAAC CGTTGCCCGA AACTGCCGAT GCGTTCCGAA GCGGTGGTCA AGGGCGACAG CAAGGTTCCG GCCATCGCCG CGGCCTCGAT TCTGGCCAAG GTCAGCCGCG ACCGCGAGAT GGCGGCGTTC GAATTGATCT ACCCGGGTTA CGGCATCAGT GGTCACAAAG GCTACCCGAC GCCCGTTCAT CTGGAAGCGC TGGTGCGCCT GGGGCCGACG CCGATTCACC GGCGTTCTTT TGCCCCGGTT CGTCAGGCTT ATGAAGCGCT GGAAGGTCTC GTGCAGGTTT AG
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Protein sequence | MSKTSMQMGL DFTLVAEVEE LVAGVDEVGR GPLCGAVVTA AVILDPNRPI LGLNDSKKLT EAKREKLYDE ICEKALSWCI ARAEVEEIDE LNILHATMLA MQRAVAGLHI QPKLAMIDGN RCPKLPMRSE AVVKGDSKVP AIAAASILAK VSRDREMAAF ELIYPGYGIS GHKGYPTPVH LEALVRLGPT PIHRRSFAPV RQAYEALEGL VQV
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