| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1103 |
|---|
| Symbol | pyrH |
|---|
| ID | 3716508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1277062 |
|---|
| End bp | 1277805 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | uridylate kinase |
|---|
| Protein accession | YP_346835 |
|---|
| Protein GI | 77457330 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.637012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGC AGGGCAGTGG TTATCAGGCT CGCTATAAAC GCATTCTACT CAAGCTTAGC
GGCGAGGCCC TGATGGGCTC GGAAGAGTTC GGGATCGATC CGAAAGTGCT GGATCGCATG
GCGCTGGAAG TCGGCCAACT GGTCGGTATC GGCGTTCAGG TCGGTCTGGT GATCGGTGGT
GGCAACCTGT TCCGCGGTGA AGCGCTGAGC AAGGCCGGCA TGGATCGGGT CACGGGCGAC
CACATGGGCA TGCTGGCCAC TGTGATGAAC GCCCTGGCCA TGCGCGACGC GCTGGAACGT
GCCAATATCT CGGCGATCGT GATGTCGGCC ATCTCGATGG TTGGTGTGAC CGATCACTAT
GACCGTCGCA AGGCCATGCG TCATCTGAAC TCCAAGGACG TGGTGATTTT CGCGGCCGGT
ACCGGCAATC CGTTCTTTAC CACGGATTCG GCAGCCTGCC TGCGCGCCAT TGAAATCGAC
GCGGACGTCG TGCTCAAGGC GACCAAGGTT GATGGCGTCT ACACCGCTGA CCCGTTCAAA
GACCCGCATG CCGAGAAGTT CGATCATCTG ACCTACGATG AAGTACTGGA TCGCAAGCTG
GGTGTAATGG ATCTGACGGC TATCTGCCTG TGCCGCGATC ACAAGATGCC GCTGCGCGTA
TTTAACATGA ACAAGCCGGG CGCCCTGCTG AACATCGTGC ATGGTGGCGC TGAAGGCACT
CTGATCGAGG AAGTCCAACA ATGA
|
|---|
| Protein sequence | MAQQGSGYQA RYKRILLKLS GEALMGSEEF GIDPKVLDRM ALEVGQLVGI GVQVGLVIGG
GNLFRGEALS KAGMDRVTGD HMGMLATVMN ALAMRDALER ANISAIVMSA ISMVGVTDHY
DRRKAMRHLN SKDVVIFAAG TGNPFFTTDS AACLRAIEID ADVVLKATKV DGVYTADPFK
DPHAEKFDHL TYDEVLDRKL GVMDLTAICL CRDHKMPLRV FNMNKPGALL NIVHGGAEGT
LIEEVQQ
|
|---|
| |