| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1081 |
|---|
| Symbol | |
|---|
| ID | 3716486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1251378 |
|---|
| End bp | 1252772 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | filamentation induced by cAMP protein Fic |
|---|
| Protein accession | YP_346813 |
|---|
| Protein GI | 77457308 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC CGCCGGTATT GAAAGGTCGG GCCGATCCGG TCTTTGAGTT GTTGATGCGC
GCGCCTCACA AGCAGCGTCT GGCGGACTAT CTTGCGTTGC TCAAGCCGCT GGATGATCAC
GGGCGGTATC TGCCTTTTGA GGATTTGCGG TATCGCTGGG CCAGCGGGCT GGATTCGCGT
TTGTGTTGGG CGTTGGTCAA GAAGGCGCGG GCCGCTCAGT ACATTCATCT TCTGCCTTTG
GGGGAGCCGG CCCAGTGGGG GAAGTTTGTG CCGACGCCAA CCGCGCAGAA GGCCCTTTCA
GTGGTTGATC GGCAAACCAC GACGGCGTCG CTGGAGTACA TGACCAGCCA GATAGGCGAG
CGGGCGCATT TCAGTTATTT GCTTAACGAT TTGATCGAGG ATGAGGCGAT CAGCAGCAGT
CAGCTGGAAG GCGCCGCGAC CACTACCCGT GTTGCCAAGG ACATGCTCAA GCAACGGCGC
CAGCCCCGGA CGCCGGATGA GCGGATGGTC ATGGGTAATT TCCGGATGAT GAATTTCGCT
TGGGAAAAGC GTTACGAGCC TTTGAGCGTG GAGTTGATTG CGTCGATGCA TCGGGTCGGT
GTCGAGGGTA TTGATGACGA GCAGTACGAC CCCGGGCTTT TCAGGACCAA CGATGAAGTG
GTGGTGCAGG ACGGCGAAGG GAATACCGTC CACTCGCCAC CGCCTGCCGC CGGATTAGTG
AGGCGACTGG ATTTGCTCTC GCAGTGGATC AATCAACCAC AGGGTTCACC TCGGCAAAAA
AACTACCTGC ATCCGCTGAT CAAGGCGATC ACGCTGCACT TTGCCCTGGG CTATGAACAT
CCCTTTCGCG ATGGCAACGG GCGGGTCGCC AGGGCGCTGT TTTACTGGCT CATGTTCAAG
CACGAGTTTT CGGCATTCCG CTATATCGCG ATCAGTCTTT TACTGCGCAA CGCGCCGGTA
AAGTACGGGC GGTCGTATTT GCACAGCGAA GCTGATGAGC TCGACCTGAC GTACTTCATC
GAGTTTCAGT GTTCGGTGAT TTTGCGGGCG GTGGAGGGTT TTACCGACGC GTACCGCAAG
CGTGTGGCGT ACAGCGAAGG CTTCGAGCGC TGGCTGACCT GTTCGGGCTT TTTTGATCGG
CTGACAGAGC GGCAGCGGGC GATTTATCAG GTGGCCAGGA GCGGGGTGGC GAAGGAGTTC
ACGGCGGGGA ACGTCAAGGA GCATCTTGGT TGTGCCTACA ACACAGCGGT GTTGACGTTG
AGCGGGTTGG TTGAGCTGCA GGTTTTCGAG AAGAAGAAAA TGGGACGCGA GTGGGTGTAC
TTTTTACGTG TGTCTGCTGG CGACGGATTG AACAACGGGA GTGAGAAAAC TCACTCCCGT
GTGGTGCCGG TTTAG
|
|---|
| Protein sequence | MKKPPVLKGR ADPVFELLMR APHKQRLADY LALLKPLDDH GRYLPFEDLR YRWASGLDSR
LCWALVKKAR AAQYIHLLPL GEPAQWGKFV PTPTAQKALS VVDRQTTTAS LEYMTSQIGE
RAHFSYLLND LIEDEAISSS QLEGAATTTR VAKDMLKQRR QPRTPDERMV MGNFRMMNFA
WEKRYEPLSV ELIASMHRVG VEGIDDEQYD PGLFRTNDEV VVQDGEGNTV HSPPPAAGLV
RRLDLLSQWI NQPQGSPRQK NYLHPLIKAI TLHFALGYEH PFRDGNGRVA RALFYWLMFK
HEFSAFRYIA ISLLLRNAPV KYGRSYLHSE ADELDLTYFI EFQCSVILRA VEGFTDAYRK
RVAYSEGFER WLTCSGFFDR LTERQRAIYQ VARSGVAKEF TAGNVKEHLG CAYNTAVLTL
SGLVELQVFE KKKMGREWVY FLRVSAGDGL NNGSEKTHSR VVPV
|
|---|
| |