| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1078 |
|---|
| Symbol | |
|---|
| ID | 3716483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 1245834 |
|---|
| End bp | 1246469 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_346810 |
|---|
| Protein GI | 77457305 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACA ATCTTTCCAC TCCAAACGGC CCCGGCCGAC CGAAGGATCC GGCCAAGCGC
CAGGCGATTC TCGAGGCGGC GAAAATCCTG TTTCTGAGTC ATGGCTATGC CAACACCAGC
ATGGACGCGG TAGCCGCCGA GGCCGGGGTG TCGAAGCTGA CGGTGTACAG CCATTTCAAC
GACAAGGAGA CGCTGTTCTC CGCCGCCGTG GTGGCTAAAT GCGAGGAGCA ATTACCGCCG
CTGTTCTTCG AATTGCCGGA CGGCATTGCG GTGGAAAATG TGTTGCTGAA CATTGCGCGA
GGCTTTCACC ATCTCATCAA CAGTGAGGAA TCGGTGAACC TGCATCGCCT GATCATGGCC
TTGGGCAGTC AGGATCCGAA GCTGTCGCTG ATCTTCTTCG AGGCCGGCCC CCAGCGCATG
GTGCAAGGCA TGGAACGATT GCTGCGGCGG ATTCACGAAA CCGGCGTGCT GAGCATCGAC
AACCCGCACA ACGCCGCCGA GCACTTCTTT TGTCTGATCA AGGGCGCCGG GAATTTCCGC
CTGTTGTACG GCTGCGGTGA GCCGCTGACC GACGAGGCGG CGGAAAGTCA TGTGCAGGAA
GTGGTCGGGC TGTTCATGCG GGCCTATCGC CCCTGA
|
|---|
| Protein sequence | MSNNLSTPNG PGRPKDPAKR QAILEAAKIL FLSHGYANTS MDAVAAEAGV SKLTVYSHFN
DKETLFSAAV VAKCEEQLPP LFFELPDGIA VENVLLNIAR GFHHLINSEE SVNLHRLIMA
LGSQDPKLSL IFFEAGPQRM VQGMERLLRR IHETGVLSID NPHNAAEHFF CLIKGAGNFR
LLYGCGEPLT DEAAESHVQE VVGLFMRAYR P
|
|---|
| |