| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1060 |
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| Symbol | lysS |
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| ID | 3716209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 1228949 |
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| End bp | 1230448 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_346792 |
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| Protein GI | 77457287 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.175669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.441756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACC AACAACTCGA CCAGGCCCTG CAACAGGAAG AAAACTCCCT GATCGCCCTG
CGCAAGGAAA AGCTTGCTGC CGAGCGCGCC AAGGGCAATG CCTTCCCGAA CGACTTCCGC
CGCGACAACT ACTGCGATGC GCTGCAGAAA CAGTACGCGG ACAAGACCAA GGAAGAGCTG
GCAGAGGCGG CGATCCCGGT CAAGGTTGCA GGTCGCATCA TGCTCAACCG TGGCTCGTTC
ATGGTGATCC AGGACATGAC CGGTCGCATC CAGGTCTACG TCAACCGCAA GACCCTGTCC
GAAGAAACCC TGGCCGCGGT GAAAACCTGG GACATGGGCG ACATCATCGC CGCCGAAGGC
ACCCTGGCCC GTTCCGGCAA GGGCGACCTG TACGTCGAGA TGACCAGCGT GCGCCTGCTG
ACCAAATCCC TGCGCCCGCT GCCGGACAAG CACCACGGCC TGACCGACAC CGAACAGCGC
TACCGTCAGC GCTACGTTGA CCTGATCGTC AACGAAGACG TGCGTCAGAC TTTCCGCGTG
CGTTCGCAAG TGATCGCGCA CATCCGCAGC TTCCTGATGA AGCGTGACTT CCTCGAAGTC
GAAACGCCGA TGCTGCAGAC CATTCCTGGC GGCGCCGCGG CCAAACCGTT CGAAACCCAC
CACAACGCGC TGGACATGGA AATGTTCCTG CGCATCGCGC CAGAGCTGTA CCTCAAGCGC
CTGGTGGTTG GCGGTTTCGA GAAAGTATTC GAGATCAACC GCAACTTCCG TAACGAAGGT
GTTTCGACGC GTCACAACCC TGAGTTCACC ATGTTGGAGT TCTACCAGGC TTACGCCGAC
TACGAAGACA ACATGGACCT GACCGAAGAA CTGTTCCGTG AACTGGCGCA GTTGGTTCTG
GGCAGCACCG ACGTGCCGTA CGGCGACAAG GTGTTCCACT TCGGCGAGCC GTTCGTGCGT
CTGTCGGTGT TCGACTCGAT CCTCAAGTAC AACCCTGAGC TGACCGCCGA TGACCTGAAC
GACATCGACA AGGCGCGCGC CATCGCCAAG AAGGCCGGCG CCAAGGTGCT GGGCTTCGAA
GGTCTGGGCA AGCTGCAGGT GATGATTTTC GAAGAGCTGG TCGAGCACAA GCTGGAACAG
CCGCACTTCA TTACCCAGTA TCCGTTCGAA GTGTCGCCGC TGGCCCGTCG CAACGACGAC
AACCCGAACG TCACCGACCG CTTCGAGCTG TTCATCGGCG GCCGTGAAAT CGCCAACGCC
TACTCCGAGC TGAACGACGC GGAAGACCAG GCCGAGCGCT TCATGGCCCA GGTGGCCGAC
AAGGACGCCG GCGACGACGA AGCCATGCAC TACGACGCCG ACTTCGTTCG TGCGCTGGAG
TACGGCATGC CGCCAACGGC CGGTGAAGGC ATCGGCATTG ACCGTCTGGT GATGCTGCTG
ACCAACTCCC CGTCGATCCG CGACGTGATC CTGTTCCCGC ACATGCGGCC ACAAGCGTAA
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| Protein sequence | MSDQQLDQAL QQEENSLIAL RKEKLAAERA KGNAFPNDFR RDNYCDALQK QYADKTKEEL
AEAAIPVKVA GRIMLNRGSF MVIQDMTGRI QVYVNRKTLS EETLAAVKTW DMGDIIAAEG
TLARSGKGDL YVEMTSVRLL TKSLRPLPDK HHGLTDTEQR YRQRYVDLIV NEDVRQTFRV
RSQVIAHIRS FLMKRDFLEV ETPMLQTIPG GAAAKPFETH HNALDMEMFL RIAPELYLKR
LVVGGFEKVF EINRNFRNEG VSTRHNPEFT MLEFYQAYAD YEDNMDLTEE LFRELAQLVL
GSTDVPYGDK VFHFGEPFVR LSVFDSILKY NPELTADDLN DIDKARAIAK KAGAKVLGFE
GLGKLQVMIF EELVEHKLEQ PHFITQYPFE VSPLARRNDD NPNVTDRFEL FIGGREIANA
YSELNDAEDQ AERFMAQVAD KDAGDDEAMH YDADFVRALE YGMPPTAGEG IGIDRLVMLL
TNSPSIRDVI LFPHMRPQA
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