| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1028 |
|---|
| Symbol | |
|---|
| ID | 3716030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 1192115 |
|---|
| End bp | 1193524 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_346760 |
|---|
| Protein GI | 77457255 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.65049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTACA TCAGTACCCG CGGCCAGGCA CCGGCCCTGA ATTTCGAAGA CGTCCTGCTG
GCCGGTCTTG CCACCGACGG CGGTCTGTAC GTCCCGGAAA ACCTGCCACG CTTCACCCAG
GAAGAAATCG CTTCCTGGGC CGGCCTGCCG TATCACGAGC TGGCTTTCCG CGTCATGCGC
CCGTTCGTCA CCGGCAGCAT TCCGGACGCC GATTTCAAAA AGATTCTTGA AGAAACCTAC
GGTGTGTTCG CCCACAACGC CGTTGCGCCG CTGCGTCAGC TGAACGGCAA CGAATGGGTG
CTGGAGCTGT TCCACGGCCC GACCCTGGCG TTCAAGGACT TCGCCCTGCA ACTGCTCGGT
CGCTTGCTCG ACTACGTGCT GGAAAAGCGC GGCGAGCGCG TGGTGATCGT CGGCGCCACT
TCGGGTGACA CCGGTTCGGC CGCCATCGAA GGCTGCAAGC ACTGCGAAAA CGTCGACATC
TTCATCCTGC ACCCGCACAA CCGTGTGTCC GACGTGCAGC GTCGGCAGAT GACCACCATC
CTCGGTGAGA ACATCCACAA CATCGCCATC GAAGGCAACT TCGATGACTG CCAGGAAATG
GTCAAGGCCA GCTTCGCCGA CCAGAGTTTC CTCAAGGGCA CTCGCCTGGT TGCAGTCAAC
TCTATCAACT GGGCGCGGAT CATGGCCCAG ATCGTTTACT ACTTCCACGC CGCCCTGCAA
TTGGGCGGCC CGGCGCGTTC GGTGTCGTTC TCGGTGCCGA CCGGCAACTT CGGCGACATC
TTCGCCGGTT ACCTGGCGCG CAATATGGGC CTGCCGATCA ACCAGTTGAT CGTCGCCACC
AACCGCAACG ACATCCTGCA CCGCTTCATG AGCGGCAACC AGTACGTCAA GGAAACCCTG
CACGCTACGC TGTCGCCGTC GATGGACATC ATGGTCTCGT CGAACTTCGA ACGCCTGCTG
TTCGACCTGC ACGGTCGCAA CGGCGCGGCG ATTGCCGGCC TGATGGATTC GTTCAAGCAG
GGCGGCGGTT TCAGCGTCGA CCAGGAACGC TGGACCGAAG CACGCAAGCT GTTCGATTCT
CTGGCCGTGG ACGATGCGCA AACCTGCGAA ACCATCGCCG AAGTCTACGA GCAGACCGGT
GAAGTGCTGG ATCCGCACAC CGCCATCGGC GTGAAAGCCG CTCGCGAATG CCGTCGCAGC
CTGGATATCC CGATGGTGAT TCTGGGCACG GCGCATCCGG TCAAGTTCCC GGACGCGGTG
GAGAAAGCCG GTGTAGGAAA AGCTCTCGAA CTACCTGCAC ATCTTTCTGA TTTGTTTGAG
AGAGAAGAGC GCTGCACTGT GCTGCCGAAT GAGCTCAAAG CCGTGCAGGC CTTTGTCAGT
CAGCATGGCA ACCGCGGCAA GCCTCTTTAA
|
|---|
| Protein sequence | MRYISTRGQA PALNFEDVLL AGLATDGGLY VPENLPRFTQ EEIASWAGLP YHELAFRVMR
PFVTGSIPDA DFKKILEETY GVFAHNAVAP LRQLNGNEWV LELFHGPTLA FKDFALQLLG
RLLDYVLEKR GERVVIVGAT SGDTGSAAIE GCKHCENVDI FILHPHNRVS DVQRRQMTTI
LGENIHNIAI EGNFDDCQEM VKASFADQSF LKGTRLVAVN SINWARIMAQ IVYYFHAALQ
LGGPARSVSF SVPTGNFGDI FAGYLARNMG LPINQLIVAT NRNDILHRFM SGNQYVKETL
HATLSPSMDI MVSSNFERLL FDLHGRNGAA IAGLMDSFKQ GGGFSVDQER WTEARKLFDS
LAVDDAQTCE TIAEVYEQTG EVLDPHTAIG VKAARECRRS LDIPMVILGT AHPVKFPDAV
EKAGVGKALE LPAHLSDLFE REERCTVLPN ELKAVQAFVS QHGNRGKPL
|
|---|
| |